Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41008 | Canola | peroxisome | 75.93 | 94.64 |
| CDY28754 | Canola | plastid | 93.7 | 93.7 |
| Bra022742.1-P | Field mustard | plastid | 93.41 | 93.41 |
| CDY52570 | Canola | plastid | 92.84 | 92.05 |
| Bra002957.1-P | Field mustard | plastid | 92.55 | 91.76 |
| CDY43024 | Canola | plastid | 92.26 | 91.74 |
| CDY47441 | Canola | plastid | 92.26 | 91.48 |
| Bra029007.1-P | Field mustard | plastid | 91.69 | 91.17 |
| CDY42479 | Canola | plastid | 67.34 | 91.09 |
| GSMUA_Achr7P00180_001 | Banana | cytosol | 22.35 | 82.98 |
| VIT_10s0116g00530.t01 | Wine grape | plastid | 77.94 | 76.62 |
| VIT_19s0177g00140.t01 | Wine grape | plastid | 77.36 | 76.49 |
| Solyc07g064160.2.1 | Tomato | plastid | 77.36 | 76.27 |
| Os07t0529600-01 | Rice | plastid | 77.08 | 75.77 |
| TraesCS7D01G373100.2 | Wheat | plastid, unclear | 75.64 | 75.21 |
| TraesCS7B01G278200.1 | Wheat | plastid | 75.36 | 74.93 |
| TraesCS7A01G376800.1 | Wheat | plastid | 75.36 | 74.93 |
| EES03134 | Sorghum | plastid | 75.64 | 74.58 |
| PGSC0003DMT400049574 | Potato | plastid | 76.22 | 74.51 |
| Zm00001d011183_P001 | Maize | plastid | 74.79 | 73.73 |
| EER99743 | Sorghum | plastid | 74.21 | 73.58 |
| Zm00001d044228_P001 | Maize | plastid | 74.21 | 72.96 |
| GSMUA_Achr2P14040_001 | Banana | plastid | 43.55 | 66.09 |
| KRH65723 | Soybean | cytosol | 40.97 | 63.27 |
| TraesCS3B01G435500.1 | Wheat | plastid | 59.89 | 61.83 |
| HORVU7Hr1G090100.3 | Barley | cytosol | 65.33 | 61.46 |
| HORVU3Hr1G090190.1 | Barley | plastid | 59.89 | 58.71 |
Protein Annotations
| PDB:1RP0 | Gene3D:3.50.50.60 | MapMan:7.2.2.1 | EntrezGene:835567 | UniProt:A0A178UNL2 | ProteinID:AED96539.1 |
| EMBL:AF419604 | EMBL:AF428355 | EMBL:AF428385 | ArrayExpress:AT5G54770 | EnsemblPlantsGene:AT5G54770 | RefSeq:AT5G54770 |
| TAIR:AT5G54770 | RefSeq:AT5G54770-TAIR-G | EnsemblPlants:AT5G54770.1 | TAIR:AT5G54770.1 | EMBL:AY054216 | EMBL:AY058094 |
| EMBL:AY143082 | Unigene:At.24888 | ProteinID:BAB08756.1 | InterPro:FAD/NAD-bd_sf | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005506 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005829 | GO:GO:0005886 | GO:GO:0006950 | GO:GO:0006974 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009228 | GO:GO:0009409 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009579 | GO:GO:0009628 | GO:GO:0009941 | GO:GO:0009987 |
| GO:GO:0010319 | GO:GO:0016020 | GO:GO:0018131 | GO:GO:0019904 | GO:GO:0042803 | GO:GO:0046872 |
| GO:GO:0052837 | InterPro:IPR036188 | HAMAP:MF_03158 | RefSeq:NP_200288.1 | ProteinID:OAO94987.1 | PFAM:PF01946 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001170 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR43422 | PANTHER:PTHR43422:SF3 | UniProt:Q38814 | SUPFAM:SSF51905 |
| InterPro:Sti35 | Symbol:THI1 | TIGRFAMs:TIGR00292 | InterPro:Thi4_fam | EMBL:U17589 | UniParc:UPI0000000D2C |
| SEG:seg | : | : | : | : | : |
Description
THI1Thiamine thiazole synthase, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A178UNL2]
Coordinates
chr5:+:22246519..22248332
Molecular Weight (calculated)
36666.4 Da
IEP (calculated)
6.165
GRAVY (calculated)
0.220
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAIASTLSL SSTKPQRLFD SSFHGSAISA APISIGLKPR SFSVRATTAG YDLNAFTFDP IKESIVSREM TRRYMTDMIT YAETDVVVVG AGSAGLSAAY
101: EISKNPNVQV AIIEQSVSPG GGAWLGGQLF SAMIVRKPAH LFLDEIGVAY DEQDTYVVVK HAALFTSTIM SKLLARPNVK LFNAVAAEDL IVKGNRVGGV
201: VTNWALVAQN HHTQSCMDPN VMEAKIVVSS CGHDGPFGAT GVKRLKSIGM IDHVPGMKAL DMNTAEDAIV RLTREVVPGM IVTGMEVAEI DGAPRMGPTF
301: GAMMISGQKA GQLALKALGL PNAIDGTLVG NLSPELVLAA ADSAETVDA
101: EISKNPNVQV AIIEQSVSPG GGAWLGGQLF SAMIVRKPAH LFLDEIGVAY DEQDTYVVVK HAALFTSTIM SKLLARPNVK LFNAVAAEDL IVKGNRVGGV
201: VTNWALVAQN HHTQSCMDPN VMEAKIVVSS CGHDGPFGAT GVKRLKSIGM IDHVPGMKAL DMNTAEDAIV RLTREVVPGM IVTGMEVAEI DGAPRMGPTF
301: GAMMISGQKA GQLALKALGL PNAIDGTLVG NLSPELVLAA ADSAETVDA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.