Factsheet for GSMUA_Achr11P09050_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P03150_001	Banana	plasma membrane	95.12	95.12
GSMUA_Achr5P01070_001	Banana	cytosol	94.86	94.86
GSMUA_Achr5P01330_001	Banana	cytosol	90.75	90.75
EES12864	Sorghum	cytosol, plastid	89.2	89.2
Zm00001d004841_P002	Maize	cytosol	89.2	89.2
Zm00001d004839_P005	Maize	cytosol	89.2	89.2
Zm00001d003680_P003	Maize	cytosol	89.2	89.2
Zm00001d028622_P001	Maize	cytosol	88.95	88.95
GSMUA_AchrUn_...	Banana	cytosol	97.17	88.94
KXG27825	Sorghum	cytosol	88.43	88.43
Os11t0168200-01	Rice	nucleus	88.17	88.17
TraesCS4A01G208000.1	Wheat	golgi, unclear	87.92	87.92
TraesCS4B01G111500.1	Wheat	cytosol	87.66	87.66
Os12t0167900-01	Rice	plastid	87.4	87.4
TraesCS5B01G118400.1	Wheat	cytosol, unclear	87.15	87.15
Zm00001d003683_P005	Maize	cytosol, mitochondrion, plasma membrane, plastid	89.2	86.75
TraesCS5A01G112400.1	Wheat	cytosol, golgi, nucleus	86.63	86.63
Zm00001d002463_P001	Maize	cytosol	55.53	85.38
HORVU4Hr1G019980.1	Barley	cytosol	87.66	82.97
HORVU5Hr1G036630.1	Barley	plasma membrane	87.15	82.89
GSMUA_Achr6P19610_001	Banana	plastid	9.51	47.44

Protein Annotations

MapMan:17.1.2.1.1	Gene3D:2.40.30.10	Gene3D:3.30.1430.10	Gene3D:4.10.960.10	GO:GO:0003674	GO:GO:0003735
GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840
GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538
GO:GO:0030529	EnsemblPlantsGene:GSMUA_Achr11G09050_001	EnsemblPlants:GSMUA_Achr11P09050_001	EnsemblPlants:GSMUA_Achr11T09050_001	UniProt:M0RQN5	PFAM:PF00297
ScanProsite:PS00474	PANTHER:PTHR11363	PANTHER:PTHR11363:SF6	InterPro:Ribosomal_L3	InterPro:Ribosomal_L3_CS	SUPFAM:SSF50447
InterPro:Transl_B-barrel_sf	UniParc:UPI000294EA02	SEG:seg	:	:	:

Description

60S ribosomal protein L3 [Source:GMGC_GENE;Acc:GSMUA_Achr11G09050_001]

Coordinates

chr11:-:6979337..6983740

Molecular Weight (calculated)

44692.6 Da

IEP (calculated)

10.803

GRAVY (calculated)

-0.677

Length

389 amino acids

Sequence
(BLAST)

001: MSHRKFEHPR HGSLGFLPRK RASRHRGKVK SFPRDDPTKS CRLTAFLGYK SGMTHIVREV DKPGSKLHKK ETCEAVTIVE TPPMVVVGVV AYVKTPRGLR
101: SLNTVWAQHL SEEVRRRFYK SWYKSKKKAF TKYSKKYESE EGKKEIQTQL EKMKKYASVI RVLAHTQIRK MKGLKQKKAH LMEIQVNGGT VAQKVDYAYS
201: FFEKQIPIDA VFQKDEMIDV IGVTKGKGYE GVVTRWGVTR LPRKTHRGLR KVACIGAWHP ARVSYTVARA GQNGYHHRTE MNKKIYKIGK AGDESHTAVT
301: EFDRTEKDIT PMGGFPHYGI VKDDYLMIKG CCVGPKKRVV TLRQSLLKQT SRVALEEIKL KFIDTSSKFG HGRFQTTQEK QKFYGRLKV

Best Arabidopsis Sequence Match ( AT1G43170.5 )
(BLAST)

001: MSHRKFEHPR HGSLGFLPRK RANRHRGKVK AFPKDDQTKP CKFTAFMGYK AGMTHIVREV EKPGSKLHKK ETCEAVTIIE TPAMVVVGVV AYVKTPRGLR
101: SLNTVWAQHL SEEVRRRFYK NWAKSKKKAF TGYAKQYDSE DGKKGIQAQL EKMKKYATVI RVLAHTQIRK MKGLKQKKAH MMEIQINGGT IAQKVDFAYS
201: FFEKQIPIEA VFQKDEMIDI IGVTKGKGYE GVVTRWGVTR LPRKTHRGLR KVACIGAWHP ARVSYTVARA GQNGYHHRTE LNKKIYRLGK VGTEAHTAMT
301: EYDRTEKDVT PMGGFPHYGI VKDDYLMIKG CCVGPKKRVV TLRQSLLTQT SRLALEEIKL KFIDTASIFG HGRFQTSLEK MRFYNRVTK

Arabidopsis Description

ARP160S ribosomal protein L3-1 [Source:UniProtKB/Swiss-Prot;Acc:P17094]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.