Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0157100-01 | Rice | mitochondrion | 23.94 | 65.41 |
| TraesCS3D01G002000.1 | Wheat | nucleus | 17.94 | 63.69 |
| TraesCS7A01G299200.1 | Wheat | nucleus | 25.16 | 57.41 |
| TraesCS7B01G200900.2 | Wheat | nucleus | 26.62 | 53.25 |
| TraesCS7D01G026600.2 | Wheat | nucleus, plastid | 26.3 | 52.26 |
| KXG24466 | Sorghum | nucleus | 27.11 | 52.19 |
| TraesCS3B01G012200.1 | Wheat | nucleus | 26.3 | 51.35 |
| KRH47209 | Soybean | nucleus | 27.11 | 50.68 |
| HORVU3Hr1G001430.1 | Barley | nucleus | 25.65 | 50.4 |
| VIT_09s0002g03510.t01 | Wine grape | nucleus | 28.65 | 50.28 |
| KRH44275 | Soybean | nucleus | 26.87 | 49.7 |
| TraesCS3A01G009400.2 | Wheat | nucleus | 26.06 | 49.69 |
| Bra009582.1-P | Field mustard | nucleus | 22.56 | 48.26 |
| AT1G79730.1 | Thale cress | nucleus | 23.05 | 48.22 |
| Solyc03g121020.2.1 | Tomato | nucleus | 27.27 | 48.14 |
| CDY40363 | Canola | nucleus | 22.32 | 47.66 |
| CDY10443 | Canola | nucleus | 22.32 | 47.58 |
| Zm00001d049548_P004 | Maize | nucleus, plastid | 26.62 | 45.43 |
| Zm00001d024567_P004 | Maize | nucleus | 25.65 | 41.25 |
Protein Annotations
| MapMan:15.3.6.1.1 | MapMan:15.5.17 | Gene3D:3.30.310.150 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005654 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006368 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016570 |
| GO:GO:0016593 | GO:GO:0019538 | EnsemblPlantsGene:GSMUA_Achr3G00330_001 | EnsemblPlants:GSMUA_Achr3P00330_001 | EnsemblPlants:GSMUA_Achr3T00330_001 | InterPro:IPR003441 |
| InterPro:IPR036093 | UniProt:M0SAK1 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFAM:PF03985 |
| PFscan:PS51005 | InterPro:RNA_pol_II-assoc_Paf1 | SUPFAM:SSF101941 | UniParc:UPI000296B2E6 | SEG:seg | : |
Description
ELF7, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G00330_001]
Coordinates
chr3:-:274491..290648
Molecular Weight (calculated)
139226.0 Da
IEP (calculated)
4.877
GRAVY (calculated)
-0.874
Length
1232 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAIALASLP LGFRFHPTDE ELVNHYLKRK ITGRIKSEMQ VIPEIDVCKC EPWDLPEKSL IRSNDPEWFF FAPKDRKYPN GHRSNRATEA GYWKATGKDR
0101: VIRSKSSAAK STIIGMKKTL VFHRGRAPHG VRTNWIMHEY RTTELEFESG DQGGYVLYRL FKKPEERISS TNAEEMEVNG FSPGDTQHDA DMTEETETQM
0201: NHDSPESDLQ EEPQSMPDSV QKQPADIEMW LTGKSDGSTR VSVKPEMNCF NLDSPDEEAK AREKADPPQD AFAKFCDQEF AQIGHGVPNI SSQILPHSSY
0301: PLLSDINEEL HIGLYPVDST VGDDLDAILN SILSVDDCSS GASIIPKEPF AESLPEHSPW DSASHRDGES SSDIETEPSL LQHAADLETC EWCCGSSLLP
0401: TDSLQIDGSV VSPGATMQLS TLYENASLLP YDISGPDVYS VDYGAESLQD LFNSLEELGS QNPISDCRDD LEGTGIQIRS RQAQQYQPNS DNLLLKQGTA
0501: GRRLRLQSSI RKVQFGSASD ELSSTNDDRD KESTAEAKRE LFYSMEEAIS EKNVTNRDDL MDSGIKIRAR QVQHSANKLS TQEVQTLSEF TRHNELQFGS
0601: ISDGVSSIRS NFEDKVGRTE AGDHADDGIS ESEESRLPAF LDKLEDLSIH DADETSSKYQ ESKSVLRSRR TSTNDSDNIP TYPSNRKAPR NQSSPLVPPD
0701: VGQRHQGARE ALPPGRQPKL SLPPKQQKPP SAPPAGRASA QPGGPNGTSM RVETEEERRL RKRREYEKQK QEEKRQLLLK QSQATVLQKT QMMVSGSARP
0801: HGSITGSRIA ERRTTPFLSG ERIENRLKKP TTFICKMKFR NDLPDPTAQP KLLAMHKDKD RYTKYTITSL EKMHKPKLYV EQDLGVPLDL LDMSVYNPSA
0901: VRTALSPEDE ELLLDDEVVT PIKQGGIRRK ERPTDKGVSW LVKTQYISPI SMEAAKMSLT EKQAKEIRES KEGRNLFLEN LNNRDRQIQT IEESFRAAKL
1001: PPVHQTKPEL EAVDILPLLP DFDRCEDQFV MVNFDGDPTA DSEQYNKLDR SIRDELESQV IFFHMFSTNG SDPMNPEKFL AYMVPQPDEL YKDLKSENED
1101: TSYSWVREYH WDVRGDDADD PTTYFVTFGE KDARYLPLPT KLVLQKKKAK EGRSGDEIEQ FPVPSRVTVR KKSTTTYGEP NEYGEASRNN EKLDVRNIKR
1201: GRSSMDDDLE RQHKFQRTED IDQFSGEEDM SD
0101: VIRSKSSAAK STIIGMKKTL VFHRGRAPHG VRTNWIMHEY RTTELEFESG DQGGYVLYRL FKKPEERISS TNAEEMEVNG FSPGDTQHDA DMTEETETQM
0201: NHDSPESDLQ EEPQSMPDSV QKQPADIEMW LTGKSDGSTR VSVKPEMNCF NLDSPDEEAK AREKADPPQD AFAKFCDQEF AQIGHGVPNI SSQILPHSSY
0301: PLLSDINEEL HIGLYPVDST VGDDLDAILN SILSVDDCSS GASIIPKEPF AESLPEHSPW DSASHRDGES SSDIETEPSL LQHAADLETC EWCCGSSLLP
0401: TDSLQIDGSV VSPGATMQLS TLYENASLLP YDISGPDVYS VDYGAESLQD LFNSLEELGS QNPISDCRDD LEGTGIQIRS RQAQQYQPNS DNLLLKQGTA
0501: GRRLRLQSSI RKVQFGSASD ELSSTNDDRD KESTAEAKRE LFYSMEEAIS EKNVTNRDDL MDSGIKIRAR QVQHSANKLS TQEVQTLSEF TRHNELQFGS
0601: ISDGVSSIRS NFEDKVGRTE AGDHADDGIS ESEESRLPAF LDKLEDLSIH DADETSSKYQ ESKSVLRSRR TSTNDSDNIP TYPSNRKAPR NQSSPLVPPD
0701: VGQRHQGARE ALPPGRQPKL SLPPKQQKPP SAPPAGRASA QPGGPNGTSM RVETEEERRL RKRREYEKQK QEEKRQLLLK QSQATVLQKT QMMVSGSARP
0801: HGSITGSRIA ERRTTPFLSG ERIENRLKKP TTFICKMKFR NDLPDPTAQP KLLAMHKDKD RYTKYTITSL EKMHKPKLYV EQDLGVPLDL LDMSVYNPSA
0901: VRTALSPEDE ELLLDDEVVT PIKQGGIRRK ERPTDKGVSW LVKTQYISPI SMEAAKMSLT EKQAKEIRES KEGRNLFLEN LNNRDRQIQT IEESFRAAKL
1001: PPVHQTKPEL EAVDILPLLP DFDRCEDQFV MVNFDGDPTA DSEQYNKLDR SIRDELESQV IFFHMFSTNG SDPMNPEKFL AYMVPQPDEL YKDLKSENED
1101: TSYSWVREYH WDVRGDDADD PTTYFVTFGE KDARYLPLPT KLVLQKKKAK EGRSGDEIEQ FPVPSRVTVR KKSTTTYGEP NEYGEASRNN EKLDVRNIKR
1201: GRSSMDDDLE RQHKFQRTED IDQFSGEEDM SD
001: MASYRPPYPP LPQPPSQNSL APPPPPPSLP PPVPPPPPSH QPYSYPPPPP PPPHAYYQQG PHYPQFNQLQ APPPPPPPSA PPPLVPDPPR HQGPNDHEKG
101: ASKQVGRRER AKPDPSKHHH RSHLPHSKKI ETEEERRLRK KRELEKQRQD EKHRQQMKNS HKSQMPKGHT EEKKPTPLLT TDRVENRLKK PTTFICKLKF
201: RNELPDPSAQ LKLMTIKRDK DQFTKYTITS LEKLWKPKIF VEPDLGIPLD LLDLSVYNPP KVKAPLAPED EELLRDDDAV TPIKKDGIRR KERPTDKGMS
301: WLVKTQYISS INNESARQSL TEKQAKELRE MKGGINILHN LNNRERQIKD IEASFEACKS RPVHATNKNL QPVEVLPLLP YFDRYDEQFV VANFDGAPIA
401: DSEFFGKLDP SIRDAHESRA ILKSYVVAGS DTANPEKFLA YMVPSLDELS KDIHDENEEI SYTWVREYLW DVQPNANDPG TYLVSFDNGT ASYLPLPMRL
501: NLRKKRAREG RSSDEIEHFP VPSRVTVRRR STVSVIEHKD SGVYSSRVGA SSSKMRRLED EGGLGRSWKH EPEQDANQYS DGNEDDYSE
101: ASKQVGRRER AKPDPSKHHH RSHLPHSKKI ETEEERRLRK KRELEKQRQD EKHRQQMKNS HKSQMPKGHT EEKKPTPLLT TDRVENRLKK PTTFICKLKF
201: RNELPDPSAQ LKLMTIKRDK DQFTKYTITS LEKLWKPKIF VEPDLGIPLD LLDLSVYNPP KVKAPLAPED EELLRDDDAV TPIKKDGIRR KERPTDKGMS
301: WLVKTQYISS INNESARQSL TEKQAKELRE MKGGINILHN LNNRERQIKD IEASFEACKS RPVHATNKNL QPVEVLPLLP YFDRYDEQFV VANFDGAPIA
401: DSEFFGKLDP SIRDAHESRA ILKSYVVAGS DTANPEKFLA YMVPSLDELS KDIHDENEEI SYTWVREYLW DVQPNANDPG TYLVSFDNGT ASYLPLPMRL
501: NLRKKRAREG RSSDEIEHFP VPSRVTVRRR STVSVIEHKD SGVYSSRVGA SSSKMRRLED EGGLGRSWKH EPEQDANQYS DGNEDDYSE
Arabidopsis Description
VIP2Protein PAF1 homolog [Source:UniProtKB/Swiss-Prot;Acc:F4HQA1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.