Factsheet for HORVU2Hr1G118340.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G541700.1	Wheat	mitochondrion	76.0	69.34
GSMUA_Achr1P09520_001	Banana	cytosol	63.2	67.91
Os04t0668600-01	Rice	plastid	69.07	61.67
EES11618	Sorghum	plastid	68.0	60.43
Zm00001d026558_P001	Maize	cytosol, mitochondrion, plastid	67.2	60.0
Zm00001d026557_P001	Maize	cytosol, mitochondrion, plastid	67.2	60.0
PGSC0003DMT400003737	Potato	cytosol	62.67	53.65
Solyc02g089310.1.1	Tomato	cytosol, plastid	62.4	53.42
KRH45144	Soybean	cytosol, plastid	62.4	53.42
VIT_14s0083g00810.t01	Wine grape	cytosol	62.13	53.32
CDX78648	Canola	cytosol, plastid	60.8	52.41
CDX70633	Canola	cytosol, plastid	60.53	52.3
Bra006317.1-P	Field mustard	cytosol, plastid	60.53	52.18
AT5G15710.2	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	60.8	50.89
KRH01425	Soybean	cytosol	60.0	49.78
HORVU3Hr1G059460.1	Barley	cytosol	22.4	20.9
HORVU7Hr1G108970.1	Barley	cytosol, plasma membrane, plastid	17.33	14.84
HORVU5Hr1G025530.5	Barley	cytosol	12.27	11.33
HORVU2Hr1G030810.1	Barley	plastid	14.13	9.71

Protein Annotations

EnsemblPlants:HORVU2Hr1G118340.2	EnsemblPlantsGene:HORVU2Hr1G118340	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	ncoils:Coil	PANTHER:PTHR45291	SEG:seg	SUPFAM:SSF117281
MapMan:19.2.2.8.1.4.6	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:742206748..742207877

Molecular Weight (calculated)

34257.5 Da

IEP (calculated)

8.947

GRAVY (calculated)

-0.085

Length

375 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXTELXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXS DVYKRQAFAR GSAPTHCAAL
101: SLPLRARYRL PLGFLPAWDL WLVGSSGGLV CFSGFDGSSV FRTLVCNPLT QAWRLLPEMH HNQQRQLVLA VDRKLRSFKV IATSDVYGET LPTEVYDSKA
201: DRWSLHQMMP AENLCSSKMA FCDSRLYLET LSPLGLMMYK VDAGKWEHIP AKFPRSLLDG YLVAGARKRL FLVGRIGLYS TLQSMRIWEL DHGRSVWVEI
301: SRMPPKYFRA LLRLSAERFE CFGQDNLICF TSWNQGRGLL YDVDKKAWSW IAGCASQLCN TQFCFYEPRF DTSIY

Best Arabidopsis Sequence Match ( AT5G15710.2 )
(BLAST)

001: MERLGFWGLL MGSVEKSLDS GNSLACSASA KNGDEESSTS SKQVSPLKGS GSRNTSPLGR VGSRNTSPSR QKVVKTKPRG LEEETVASFG KQVVADVQME
101: DGIWAMLPED LLNEILARVP PFMIFRIRSV CKKWNLILQD NSFLKFHSNV SSHGPCLLTF WKNSPQIPQC SVFSLPLKTW YKIPFTFLPP WAFWLVGSSG
201: GLVCFSGLDG LTFRTLVCNP LMQSWRTLPS MHYNQQRQLI MVVDRSDKSF KVIATSDIYG DKSLPTEVYD SKTDKWSLHQ IMPAVNLCSS KMAYCDSRLY
301: LETLSPLGLM MYRLDSGQWE HIPAKFPRSL LDGYLVAGTQ KRLFLVGRIG LYSTLQSMRI WELDHTKVSW VEISRMPPKY FRALLRLSAE RFECFGQDNL
401: ICFTSWNQGK GLLYNVDKKI WSWISGCALQ SCNSQVCFYE PRFDASVL

Arabidopsis Description

F-box/kelch-repeat protein At5g15710 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFV5]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.