CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH45144	Soybean	cytosol, plastid	92.26	95.21
GSMUA_Achr1P09520_001	Banana	cytosol	64.38	83.38
VIT_14s0083g00810.t01	Wine grape	cytosol	80.09	82.84
Solyc02g089310.1.1	Tomato	cytosol, plastid	78.98	81.51
PGSC0003DMT400003737	Potato	cytosol	78.98	81.51
AT5G15710.2	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	78.98	79.69
CDX78648	Canola	cytosol, plastid	75.22	78.16
Bra006317.1-P	Field mustard	cytosol, plastid	75.0	77.93
CDX70633	Canola	cytosol, plastid	74.78	77.88
Os04t0668600-01	Rice	plastid	64.82	69.76
Zm00001d026558_P001	Maize	cytosol, mitochondrion, plastid	62.39	67.14
Zm00001d026557_P001	Maize	cytosol, mitochondrion, plastid	62.39	67.14
EES11618	Sorghum	plastid	62.39	66.82
TraesCS2D01G541700.1	Wheat	mitochondrion	60.4	66.42
HORVU2Hr1G118340.2	Barley	cytosol	49.78	60.0
KRH52086	Soybean	plastid	19.25	25.0
KRH68853	Soybean	cytosol	21.9	24.57
KRH61403	Soybean	plastid	19.03	23.96
KRG97101	Soybean	cytosol	21.46	23.95
KRH31515	Soybean	cytosol	23.45	23.56
KRH42420	Soybean	plastid	22.79	23.41
KRH42677	Soybean	cytosol, nucleus, plasma membrane	23.45	23.4
KRH58532	Soybean	plastid	22.12	23.26
KRH58777	Soybean	cytosol	23.01	22.91
KRH47995	Soybean	cytosol	13.5	22.68
KRH15449	Soybean	cytosol, mitochondrion, nucleus	19.25	22.42
KRG97395	Soybean	cytosol	22.79	22.29
KRH05328	Soybean	cytosol	18.81	20.88
KRH15707	Soybean	cytosol	18.36	20.39
KRH61620	Soybean	cytosol	18.36	20.1
KRH52288	Soybean	cytosol	18.14	19.85

Protein Annotations

Gene3D:1.20.1280.50	EntrezGene:100795294	MapMan:19.2.2.8.1.4.6	Gene3D:2.120.10.80	UniProt:A0A0R0F529	EMBL:ACUP02011514
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	EnsemblPlantsGene:GLYMA_18G275900	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001810	InterPro:IPR015915	EnsemblPlants:KRH01425	ProteinID:KRH01425	ProteinID:KRH01425.1	InterPro:Kelch-typ_b-propeller
PFAM:PF00646	PFscan:PS50181	PANTHER:PTHR45291	SMART:SM00256	SUPFAM:SSF117281	SUPFAM:SSF81383
UniParc:UPI0006EDDD7D	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:-:55808344..55811631

Molecular Weight (calculated)

51355.9 Da

IEP (calculated)

8.205

GRAVY (calculated)

-0.188

Length

452 amino acids

Sequence
(BLAST)

001: MELEDMDCLG HSSKSGPGVC VAQSVENGGF GGDGRCCKQA SPPRSGGSRN TSPMSRAGSR NTSPLRQKVV KTKPRGLDEE TLATFGKVVH ADVQMEDNIW
101: AMLPEDLLHE ILARVPPFLI FRLRLVCKRW NSLLQDSSFL KFHSSVPSHG PCLFTFWKNT QTPQCSVFSL PLKTWNRIPF TFLPPWAFWL VGSSGGLVCF
201: SGHDGLTFKT LVCNPLTQTW RALPSMHYNQ QRQLVLVVDR VDQSFKVIAT SDIYGDKSLP TEVYDSNTDS WTVHQIMPAV NLCSSKMAYC DSRLYLETLS
301: PLGLMMYRLD TGHWEHIPAK FPRSLLDGYL VAGTQKRLFL VGRIGLYSTL QSMRIWELDH TKITWVEISR MPPKYFRALL RLSAERFECF GQDNLICFTS
401: WNQGKGLLYD VDKKIWSWIG GCALQSYNNQ VCFYEPSMPD CECWFSSIDR FL

Best Arabidopsis Sequence Match ( AT5G15710.2 )
(BLAST)

001: MERLGFWGLL MGSVEKSLDS GNSLACSASA KNGDEESSTS SKQVSPLKGS GSRNTSPLGR VGSRNTSPSR QKVVKTKPRG LEEETVASFG KQVVADVQME
101: DGIWAMLPED LLNEILARVP PFMIFRIRSV CKKWNLILQD NSFLKFHSNV SSHGPCLLTF WKNSPQIPQC SVFSLPLKTW YKIPFTFLPP WAFWLVGSSG
201: GLVCFSGLDG LTFRTLVCNP LMQSWRTLPS MHYNQQRQLI MVVDRSDKSF KVIATSDIYG DKSLPTEVYD SKTDKWSLHQ IMPAVNLCSS KMAYCDSRLY
301: LETLSPLGLM MYRLDSGQWE HIPAKFPRSL LDGYLVAGTQ KRLFLVGRIG LYSTLQSMRI WELDHTKVSW VEISRMPPKY FRALLRLSAE RFECFGQDNL
401: ICFTSWNQGK GLLYNVDKKI WSWISGCALQ SCNSQVCFYE PRFDASVL

Arabidopsis Description

F-box/kelch-repeat protein At5g15710 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFV5]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.