Factsheet for GSMUA_Achr1P09520_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400003737	Potato	cytosol	86.82	69.18
VIT_14s0083g00810.t01	Wine grape	cytosol	86.53	69.11
Solyc02g089310.1.1	Tomato	cytosol, plastid	86.53	68.95
Os04t0668600-01	Rice	plastid	82.23	68.33
KRH45144	Soybean	cytosol, plastid	85.67	68.26
CDX70633	Canola	cytosol, plastid	84.24	67.74
CDX78648	Canola	cytosol, plastid	84.24	67.59
Bra006317.1-P	Field mustard	cytosol, plastid	83.95	67.36
EES11618	Sorghum	plastid	80.8	66.82
TraesCS2D01G541700.1	Wheat	mitochondrion	78.22	66.42
Zm00001d026558_P001	Maize	cytosol, mitochondrion, plastid	79.66	66.19
Zm00001d026557_P001	Maize	cytosol, mitochondrion, plastid	79.66	66.19
AT5G15710.2	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	84.81	66.07
KRH01425	Soybean	cytosol	83.38	64.38
HORVU2Hr1G118340.2	Barley	cytosol	67.91	63.2
GSMUA_Achr3P03450_001	Banana	cytosol	25.21	23.72
GSMUA_AchrUn_...	Banana	cytosol	26.07	23.64
GSMUA_Achr7P10710_001	Banana	cytosol	24.64	22.93
GSMUA_Achr9P05330_001	Banana	cytosol	26.07	22.64
GSMUA_Achr6P14190_001	Banana	cytosol	24.64	22.63
GSMUA_Achr10P...	Banana	cytosol	24.36	22.37
GSMUA_Achr3P23630_001	Banana	plastid	23.5	21.47
GSMUA_Achr10P...	Banana	cytosol	20.63	17.52
GSMUA_Achr7P11470_001	Banana	nucleus	17.19	17.05
GSMUA_Achr8P27920_001	Banana	golgi, mitochondrion, plasma membrane, plastid	23.78	15.43

Protein Annotations

EnsemblPlants:GSMUA_Achr1P09520_001	EnsemblPlants:GSMUA_Achr1T09520_001	EnsemblPlantsGene:GSMUA_Achr1G09520_001	Gene3D:1.20.1280.50	Gene3D:2.120.10.80	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	InterPro:IPR015915
InterPro:Kelch-typ_b-propeller	PANTHER:PTHR45291	PFAM:PF00646	PFscan:PS50181	SMART:SM00256	SUPFAM:SSF117281
SUPFAM:SSF81383	UniParc:UPI000294D92D	UniProt:M0RYG1	MapMan:19.2.2.8.1.4.6	:	:

Description

F-box/kelch-repeat protein At5g15710 [Source:GMGC_GENE;Acc:GSMUA_Achr1G09520_001]

Coordinates

chr1:-:7310256..7311305

Molecular Weight (calculated)

40311.0 Da

IEP (calculated)

8.528

GRAVY (calculated)

0.027

Length

349 amino acids

Sequence
(BLAST)

001: MEDSIWALLP EDLLMEVLAR VPPFLIFRLR SVCRRWNSIL QDRSFLTSHS QVPSHGPCLL TFWKNSQAHQ CSVFSLPLKT WYKIPFVFLP DWAFWLVGSS
101: GGLVCFSGYD GLSFRMLVCN PLTQAWRVLP GMHYNQQRQL ILVTDKVDRS FKVIATSDIY GNRTLPTEVY DSKLDGWSVH QVMPAVNLCS SKMAFCDSRL
201: YLETLSPLGL MMYRVDTGQW EHIPAKFPRS LLDGYLVAGA QKRLFLVGRI GLYSTLQSMR IWELDHAKTV WVEISRMPPK YFRALLRLSA ERFDCFGQDN
301: LICFTSWNQG KGLLYDVDKK AWSWIAGCAI QLCNSQVCFY EPRFDTSIY

Best Arabidopsis Sequence Match ( AT5G15710.2 )
(BLAST)

001: MERLGFWGLL MGSVEKSLDS GNSLACSASA KNGDEESSTS SKQVSPLKGS GSRNTSPLGR VGSRNTSPSR QKVVKTKPRG LEEETVASFG KQVVADVQME
101: DGIWAMLPED LLNEILARVP PFMIFRIRSV CKKWNLILQD NSFLKFHSNV SSHGPCLLTF WKNSPQIPQC SVFSLPLKTW YKIPFTFLPP WAFWLVGSSG
201: GLVCFSGLDG LTFRTLVCNP LMQSWRTLPS MHYNQQRQLI MVVDRSDKSF KVIATSDIYG DKSLPTEVYD SKTDKWSLHQ IMPAVNLCSS KMAYCDSRLY
301: LETLSPLGLM MYRLDSGQWE HIPAKFPRSL LDGYLVAGTQ KRLFLVGRIG LYSTLQSMRI WELDHTKVSW VEISRMPPKY FRALLRLSAE RFECFGQDNL
401: ICFTSWNQGK GLLYNVDKKI WSWISGCALQ SCNSQVCFYE PRFDASVL

Arabidopsis Description

F-box/kelch-repeat protein At5g15710 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFV5]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.