Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol | 82.67 | 70.8 |
| VIT_04s0008g03190.t01 | Wine grape | cytosol | 56.82 | 49.14 |
| KRH15707 | Soybean | cytosol | 55.4 | 47.91 |
| KRH05328 | Soybean | cytosol | 55.11 | 47.67 |
| KRH52288 | Soybean | cytosol | 55.11 | 46.97 |
| KRH61620 | Soybean | cytosol | 54.83 | 46.73 |
| Solyc08g067300.1.1 | Tomato | nucleus | 50.28 | 42.75 |
| Zm00001d029442_P001 | Maize | cytosol, nucleus, plastid | 48.58 | 42.64 |
| PGSC0003DMT400019032 | Potato | nucleus | 50.0 | 42.11 |
| Bra011423.1-P | Field mustard | nucleus | 48.3 | 41.67 |
| KXG39191 | Sorghum | nucleus | 49.43 | 41.43 |
| Os03t0399400-01 | Rice | mitochondrion | 48.01 | 41.42 |
| Os07t0617700-01 | Rice | cytosol | 47.44 | 41.13 |
| CDX75335 | Canola | nucleus | 47.16 | 40.69 |
| CDX68951 | Canola | cytosol | 47.44 | 40.63 |
| CDY71979 | Canola | cytosol | 45.45 | 40.61 |
| TraesCS5B01G100300.1 | Wheat | cytosol, plastid | 46.31 | 40.55 |
| TraesCS2D01G175100.1 | Wheat | cytosol | 48.01 | 40.53 |
| TraesCS2A01G167400.1 | Wheat | cytosol | 48.01 | 40.53 |
| CDX72391 | Canola | cytosol | 45.45 | 40.51 |
| OQU90263 | Sorghum | cytosol, mitochondrion, plastid | 47.16 | 40.29 |
| TraesCS2B01G193700.1 | Wheat | cytosol | 47.44 | 40.24 |
| Bra037018.1-P | Field mustard | cytosol | 44.89 | 40.2 |
| Zm00001d006874_P001 | Maize | cytosol | 45.45 | 39.51 |
| Zm00001d022151_P001 | Maize | cytosol, mitochondrion, plastid | 45.17 | 38.31 |
| TraesCS5D01G106500.1 | Wheat | cytosol | 47.44 | 37.11 |
| TraesCS5A01G094200.1 | Wheat | cytosol | 46.88 | 36.5 |
| AT4G33160.2 | Thale cress | cytosol | 48.01 | 32.63 |
| HORVU5Hr1G025530.5 | Barley | cytosol | 36.36 | 31.53 |
| HORVU2Hr1G030810.1 | Barley | plastid | 47.73 | 30.77 |
| GSMUA_AchrUn_... | Banana | cytosol | 20.74 | 18.96 |
| GSMUA_Achr9P05330_001 | Banana | cytosol | 20.74 | 18.16 |
| GSMUA_Achr1P09520_001 | Banana | cytosol | 17.05 | 17.19 |
| GSMUA_Achr3P23630_001 | Banana | plastid | 17.33 | 15.97 |
| GSMUA_Achr6P14190_001 | Banana | cytosol | 17.05 | 15.79 |
| GSMUA_Achr3P03450_001 | Banana | cytosol | 16.48 | 15.63 |
| GSMUA_Achr10P... | Banana | cytosol | 16.48 | 15.26 |
| GSMUA_Achr7P10710_001 | Banana | cytosol | 16.19 | 15.2 |
| GSMUA_Achr8P27920_001 | Banana | golgi, mitochondrion, plasma membrane, plastid | 17.33 | 11.34 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P11470_001 | EnsemblPlants:GSMUA_Achr7T11470_001 | EnsemblPlantsGene:GSMUA_Achr7G11470_001 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | PANTHER:PTHR45094 | PANTHER:PTHR45094:SF2 |
| PFAM:PF00646 | PFscan:PS50181 | SMART:SM00256 | SUPFAM:SSF81383 | UniParc:UPI000296A73C | UniProt:M0TGN5 |
| MapMan:35.1 | : | : | : | : | : |
Description
Putative F-box only protein 13 [Source:GMGC_GENE;Acc:GSMUA_Achr7G11470_001]
Coordinates
chr7:+:9174134..9176469
Molecular Weight (calculated)
39968.5 Da
IEP (calculated)
4.861
GRAVY (calculated)
-0.162
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQNMDLLAG KGRKRKAQEE AHTGPAFFLD ELNQDLLERV LSCLPASSFF RLSSVCKRWR SVATSETFHI ACSQILRREP WFLMVDHDLD QYIVFDTSER
101: NWKSLNHQTH IPQSHSCKPI PVAASGGLVC YRTDSGNFLV STWEDEVMLI QKGESSSESH IAGDEIIYFL SKAGDVVATN MQRSASKQYS SVLIMENGEQ
201: VIYFLSESGT VVACNLAQKT FFEYPRFLPI YFEYSIDVVE CKGEMLVVVL SEFLETASLR VWKFSKESQS WQQVAAMPPS MSHEFYGQKM DINCTGCQEI
301: IFICASSSEC SRHIMFDMAV DEWVELPKCY VDGKAKEFTA AISFEPRPEA TV
101: NWKSLNHQTH IPQSHSCKPI PVAASGGLVC YRTDSGNFLV STWEDEVMLI QKGESSSESH IAGDEIIYFL SKAGDVVATN MQRSASKQYS SVLIMENGEQ
201: VIYFLSESGT VVACNLAQKT FFEYPRFLPI YFEYSIDVVE CKGEMLVVVL SEFLETASLR VWKFSKESQS WQQVAAMPPS MSHEFYGQKM DINCTGCQEI
301: IFICASSSEC SRHIMFDMAV DEWVELPKCY VDGKAKEFTA AISFEPRPEA TV
001: MPSSATSTYL LSLKQVSLTA SSPLLLQLKD RFFHQPKLLN MGFSTGKRKS RDEEEDRVSF FASEFPMDDL NDDVLERVLS WLPTSCFFRM SSVCKRWKSS
101: QTSKSFKLAC SQIPTRDPWF FMIDNDSNSS SFVFDSTENS WKNLNRRDFL HHHRQDFIPV ASSGGLLCYR CSISGDFLLR NPLTGSSRDI PSQDNNNNKP
201: LQAVAMTTTT VTPSSYTLVT ISGEIPNLSF KIYESNADSW SKDQELESVK NNDSSLHDDY DTDSGTVYFL SKQGNVVVAS NNLQRSPSKQ YSSVITVTDE
301: AEIVYFLSSY GTIVACDLTK RCFTELPKLL PPFLEYSIDL VECEGTMYVI LLSEFFESAS LRIWRLDNNR EWVQVGMLPP ALSHELYGKK GDINCVGGAG
401: NKILVCFNAS PPEVYCRYFV YDLVAEEWNE LPKCFKDGEA VDFVSALSFQ PRIEATV
101: QTSKSFKLAC SQIPTRDPWF FMIDNDSNSS SFVFDSTENS WKNLNRRDFL HHHRQDFIPV ASSGGLLCYR CSISGDFLLR NPLTGSSRDI PSQDNNNNKP
201: LQAVAMTTTT VTPSSYTLVT ISGEIPNLSF KIYESNADSW SKDQELESVK NNDSSLHDDY DTDSGTVYFL SKQGNVVVAS NNLQRSPSKQ YSSVITVTDE
301: AEIVYFLSSY GTIVACDLTK RCFTELPKLL PPFLEYSIDL VECEGTMYVI LLSEFFESAS LRIWRLDNNR EWVQVGMLPP ALSHELYGKK GDINCVGGAG
401: NKILVCFNAS PPEVYCRYFV YDLVAEEWNE LPKCFKDGEA VDFVSALSFQ PRIEATV
Arabidopsis Description
F-box family protein [Source:TAIR;Acc:AT4G33160]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.