Factsheet for HORVU5Hr1G025530.5

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G100300.1	Wheat	cytosol, plastid	68.23	68.91
TraesCS5D01G106500.1	Wheat	cytosol	67.73	61.11
TraesCS5A01G094200.1	Wheat	cytosol	66.75	59.96
Os03t0399400-01	Rice	mitochondrion	58.62	58.33
Zm00001d029442_P001	Maize	cytosol, nucleus, plastid	56.4	57.11
KXG39191	Sorghum	nucleus	57.39	55.48
GSMUA_Achr7P11470_001	Banana	nucleus	31.53	36.36
HORVU2Hr1G030810.1	Barley	plastid	48.52	36.08
VIT_04s0008g03190.t01	Wine grape	cytosol	35.22	35.14
KRH15707	Soybean	cytosol	35.22	35.14
GSMUA_Achr10P...	Banana	cytosol	34.73	34.31
KRH05328	Soybean	cytosol	33.99	33.91
KRH52288	Soybean	cytosol	33.99	33.41
KRH61620	Soybean	cytosol	33.74	33.17
CDY71979	Canola	cytosol	30.54	31.47
CDX68951	Canola	cytosol	31.77	31.39
Bra037018.1-P	Field mustard	cytosol	30.3	31.3
CDX75335	Canola	nucleus	31.28	31.13
Bra011423.1-P	Field mustard	nucleus	31.28	31.13
CDX72391	Canola	cytosol	30.05	30.89
Solyc08g067300.1.1	Tomato	nucleus	30.79	30.19
PGSC0003DMT400019032	Potato	nucleus	30.54	29.67
AT4G33160.2	Thale cress	cytosol	32.27	25.29
HORVU7Hr1G108970.1	Barley	cytosol, plasma membrane, plastid	14.53	13.47
HORVU2Hr1G118340.2	Barley	cytosol	11.33	12.27
HORVU3Hr1G059460.1	Barley	cytosol	11.08	11.19

Protein Annotations

EnsemblPlants:HORVU5Hr1G025530.5	EnsemblPlantsGene:HORVU5Hr1G025530	InterPro:Gal_Oxase/kelch_b-propeller	ncoils:Coil	PANTHER:PTHR45094	SEG:seg
SUPFAM:SSF50965	UniParc:UPI000B46E5D9	UniProt:A0A287QQA2	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr5H:+:140302815..140304037

Molecular Weight (calculated)

39554.3 Da

IEP (calculated)

8.919

GRAVY (calculated)

-0.205

Length

406 amino acids

Sequence
(BLAST)

001: VDGGADQRQE AEVLTARPGG YPRGHAGARP RTPPAGQLLP PPCRLSRVAR GRRIRYIPRR LRPRPFPRPL VPHALRTALP GGRVRRRREI LERLPRPNGV
101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXLTGASRAL PTPPQGQGAP QLHAIAMYGS PYRVALFTGE LPDLSMAVFD SSEGSWEAPL
201: PLARRSGTSS PDAPPYGGDD TVYFLSKSGD VVATNMKRSS LKQYSSVAVP SESGAVVCFL SHSGTVLACD TANRTFAELP RILPVYFEYS IDVVACNGAS
301: YAVVLSEYLD TASLRVWQFA EGAWRQVAAM PPGMAHGFYG KKADINCVGH GDRVMVCVSS GEFNGCFMCD VRSNQWEELP KCINGDGEII EFLAAFSFEP
401: RVEINV

Best Arabidopsis Sequence Match ( AT4G33160.1 )
(BLAST)

001: MPSSATSTYL LSLKQVSLTA SSPLLLQLKD RFFHQPKLLN MGFSTGKRKS RDEEEDRVSF FASEFPMDDL NDDVLERVLS WLPTSCFFRM SSVCKRWKSS
101: QTSKSFKLAC SQIPTRDPWF FMIDNDSNSS SFVFDSTENS WKNLNRRDFL HHHRQDFIPV ASSGGLLCYR CSISGDFLLR NPLTGSSRDI PSQDNNNNKP
201: LQAVAMTTTT VTPSSYTLVT ISGEIPNLSF KIYESNADSW SKDQELESVK NNDSSLHDDY DTDSGTVYFL SKQGNVVVAS NNLQRSPSKQ YSSVITVTDE
301: AEIVYFLSSY GTIVACDLTK RCFTELPKLL PPFLEYSIDL VECEGTMYVI LLSEFFESAS LRIWRLDNNR EWVQVGMLPP ALSHELYGKK GDINCVGGAG
401: NKILVCFNAS PPEVYCRYFV YDLVAEEWNE LPKCFKDGEA VDFVSALSFQ PRIEATV

Arabidopsis Description

F-box family protein [Source:TAIR;Acc:AT4G33160]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.