CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH61620	Soybean	cytosol	92.74	92.74
KRH05328	Soybean	cytosol	77.48	78.62
KRH15707	Soybean	cytosol	75.79	76.9
VIT_04s0008g03190.t01	Wine grape	cytosol	62.23	63.15
GSMUA_Achr7P11470_001	Banana	nucleus	46.97	55.11
GSMUA_Achr10P...	Banana	cytosol	53.51	53.77
PGSC0003DMT400019032	Potato	nucleus	49.88	49.28
CDY71979	Canola	cytosol	46.97	49.24
Solyc08g067300.1.1	Tomato	nucleus	49.15	49.03
Bra037018.1-P	Field mustard	cytosol	46.49	48.85
CDX72391	Canola	cytosol	46.49	48.61
Bra011423.1-P	Field mustard	nucleus	47.94	48.53
CDX68951	Canola	cytosol	47.94	48.18
CDX75335	Canola	nucleus	47.46	48.04
Os03t0399400-01	Rice	mitochondrion	44.79	45.34
Zm00001d029442_P001	Maize	cytosol, nucleus, plastid	42.86	44.14
TraesCS5B01G100300.1	Wheat	cytosol, plastid	42.62	43.78
Os07t0617700-01	Rice	cytosol	41.89	42.61
TraesCS2D01G175100.1	Wheat	cytosol	42.86	42.45
TraesCS2B01G193700.1	Wheat	cytosol	42.37	42.17
KXG39191	Sorghum	nucleus	42.86	42.14
TraesCS2A01G167400.1	Wheat	cytosol	42.37	41.97
OQU90263	Sorghum	cytosol, mitochondrion, plastid	41.16	41.26
Zm00001d022151_P001	Maize	cytosol, mitochondrion, plastid	41.4	41.2
AT4G33160.2	Thale cress	cytosol	51.33	40.93
Zm00001d006874_P001	Maize	cytosol	39.47	40.25
TraesCS5D01G106500.1	Wheat	cytosol	43.34	39.78
TraesCS5A01G094200.1	Wheat	cytosol	42.37	38.72
HORVU5Hr1G025530.5	Barley	cytosol	33.41	33.99
HORVU2Hr1G030810.1	Barley	plastid	42.62	32.23
KRH52086	Soybean	plastid	17.43	20.69
KRH31515	Soybean	cytosol	22.28	20.44
KRH15449	Soybean	cytosol, mitochondrion, nucleus	18.89	20.1
KRH61403	Soybean	plastid	17.19	19.78
KRH68853	Soybean	cytosol	19.13	19.6
KRH42677	Soybean	cytosol, nucleus, plasma membrane	21.31	19.43
KRG97395	Soybean	cytosol	21.55	19.26
KRH45144	Soybean	cytosol, plastid	20.34	19.18
KRH58777	Soybean	cytosol	21.07	19.16
KRG97101	Soybean	cytosol	18.64	19.01
KRH58532	Soybean	plastid	19.13	18.37
KRH01425	Soybean	cytosol	19.85	18.14
KRH42420	Soybean	plastid	19.13	17.95
KRH47995	Soybean	cytosol	10.41	15.99

Protein Annotations

Gene3D:1.20.1280.50	EntrezGene:100777105	MapMan:35.1	UniProt:A0A0R0JCQ4	EMBL:ACUP02003415	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	EnsemblPlantsGene:GLYMA_06G058900	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488
GO:GO:0005515	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0031146	InterPro:IPR001810	InterPro:IPR015915
EnsemblPlants:KRH52288	ProteinID:KRH52288	ProteinID:KRH52288.1	InterPro:Kelch-typ_b-propeller	PFAM:PF00646	PFscan:PS50181
PANTHER:PTHR45094	PANTHER:PTHR45094:SF2	SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI000233A71D	:

Description

hypothetical protein

Coordinates

chr6:-:4445931..4448262

Molecular Weight (calculated)

46551.2 Da

IEP (calculated)

4.781

GRAVY (calculated)

-0.164

Length

413 amino acids

Sequence
(BLAST)

001: MECNDQRVSV SLKRKSPENG DHVLFNTFSL DDLNEDLFER ILSWLQTSTF FRLNSVCKRW KSVAASASFK LACSHIPSRE PWFLMVAPNL NQSVIFDSAE
101: STWKRLNHPS LLQEESNQDC MPVAASGGLI CYRKSSGNFI VTNPVTGSCR ELPPLQLASQ NQPLDAIVMS TSSKDQISFK IVLVFGELPN LLFKVYNSGS
201: NCWEGETALR RKTEDNSMEY DSTDDNVVYF LSKAGIVVAS NMQRSPSKQF SSVITNKNDQ EIVYFLSYSG NVVACNLTCK CFSEYPRLLP VYNEYSIDVV
301: ECNGEMLVVL LSEFLETTTL RVWKYDEANR GWHQIAAMPA ANSHEWYGKK ADINCVGAGN QIFICLNSTE LCTYVMCDLE TNKWVELPNC CINGQVIDFM
401: SAFSFEPRIE ASV

Best Arabidopsis Sequence Match ( AT4G33160.2 )
(BLAST)

001: MFTGYSFGFG DSSEEEVAQH TIFPFLLVSL SPQEYLLCRG LSTLFDRGAQ EASLLSLSLS SMPSSATSTY LLSLKQVSLT ASSPLLLQLK DRFFHQPKLL
101: NMGFSTGKRK SRDEEEDRVS FFASEFPMDD LNDDVLERVL SWLPTSCFFR MSSVCKRWKS SQTSKSFKLA CSQIPTRDPW FFMIDNDSNS SSFVFDSTEN
201: SWKNLNRRDF LHHHRQDFIP VASSGGLLCY RCSISGDFLL RNPLTGSSRD IPSQDNNNNK PLQAVAMTTT TVTPSSYTLV TISGEIPNLS FKIYESNADS
301: WSKDQELESV KNNDSSLHDD YDTDSGTVYF LSKQGNVVVA SNNLQRSPSK QYSSVITVTD EAEIVYFLSS YGTIVACDLT KRCFTELPKL LPPFLEYSID
401: LVECEGTMYV ILLSEFFESA SLRIWRLDNN REWVQVGMLP PALSHELYGK KGDINCVGGA GNKILVCFNA SPPEVYCRYF VYDLVAEEWN ELPKCFKDGE
501: AVDFVSALSF QPRIEATV

Arabidopsis Description

F-box family protein [Source:TAIR;Acc:AT4G33160]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.