Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- cytosol 1
- nucleus 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS2B01G193700.1 | Wheat | cytosol | 71.79 | 94.46 |
TraesCS2D01G175100.1 | Wheat | cytosol | 71.98 | 94.24 |
TraesCS2A01G167400.1 | Wheat | cytosol | 71.98 | 94.24 |
Os07t0617700-01 | Rice | cytosol | 53.66 | 72.17 |
OQU90263 | Sorghum | cytosol, mitochondrion, plastid | 51.47 | 68.2 |
Zm00001d022151_P001 | Maize | cytosol, mitochondrion, plastid | 50.18 | 66.02 |
Zm00001d006874_P001 | Maize | cytosol | 48.9 | 65.93 |
HORVU5Hr1G025530.5 | Barley | cytosol | 36.08 | 48.52 |
GSMUA_Achr7P11470_001 | Banana | nucleus | 30.77 | 47.73 |
KRH05328 | Soybean | cytosol | 34.07 | 45.7 |
KRH15707 | Soybean | cytosol | 34.07 | 45.7 |
VIT_04s0008g03190.t01 | Wine grape | cytosol | 32.97 | 44.23 |
GSMUA_Achr10P... | Banana | cytosol | 32.6 | 43.31 |
KRH61620 | Soybean | cytosol | 32.42 | 42.86 |
KRH52288 | Soybean | cytosol | 32.23 | 42.62 |
CDY71979 | Canola | cytosol | 29.49 | 40.86 |
CDX72391 | Canola | cytosol | 29.3 | 40.51 |
Bra037018.1-P | Field mustard | cytosol | 29.12 | 40.46 |
Solyc08g067300.1.1 | Tomato | nucleus | 29.67 | 39.13 |
PGSC0003DMT400019032 | Potato | nucleus | 29.67 | 38.76 |
CDX75335 | Canola | nucleus | 28.57 | 38.24 |
Bra011423.1-P | Field mustard | nucleus | 28.57 | 38.24 |
CDX68951 | Canola | cytosol | 28.75 | 38.2 |
AT4G33160.2 | Thale cress | cytosol | 30.77 | 32.43 |
HORVU7Hr1G108970.1 | Barley | cytosol, plasma membrane, plastid | 14.65 | 18.26 |
HORVU3Hr1G059460.1 | Barley | cytosol | 12.45 | 16.92 |
HORVU2Hr1G118340.2 | Barley | cytosol | 9.71 | 14.13 |
Protein Annotations
EnsemblPlants:HORVU2Hr1G030810.1 | EnsemblPlantsGene:HORVU2Hr1G030810 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:Gal_Oxase/kelch_b-propeller | InterPro:IPR001810 | PANTHER:PTHR45094 | PANTHER:PTHR45094:SF1 |
PFAM:PF00646 | PFscan:PS50181 | SEG:seg | SMART:SM00256 | SUPFAM:SSF50965 | SUPFAM:SSF81383 |
UniParc:UPI000B478754 | UniProt:A0A287HK80 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:114309096..114311427
Molecular Weight (calculated)
58191.0 Da
IEP (calculated)
6.059
GRAVY (calculated)
-0.182
Length
546 amino acids
Sequence
(BLAST)
(BLAST)
001: STGSARATLT PPPPRPRPRP HAHPASDLLL PSPLSSPHLT SPSFPKCIFL FRFACQREQK EPPLPPPPPP SPPHEPSSPP PPPPPLCAST HSGRRYKAGD
101: LTRTASASFL HPLPLCVFSS VRSKILDMAA ALAASGGKKR KCQELSAPEL GQLHEDMLER VLARLPPASF FRLRGVCRRW SEAAGSPAFL AACARVPSRD
201: PWFLMLSDQQ EDEQRPPCPA VAFDAAEKTW ARCRGAPGPV PVAAAGGLVL YRAPETGALT VANPLSGVSR ALPPPPPAAA PDALYAVAMY GSPYRVVLIL
301: GDLPHLSMTL FDSSKNAWED AVPLSRKTEA SPADVQAPHD DGDDDIDEDM DGDGDGAVYY LSKSGDVMVS STQRSASRQY SSAVTCRSDG GEAVAYFLSH
401: SGAVVACDLA RRVFSELPRI LPVHSEYSID VVACDGRAYV VVLSEYLDTA SLRVWEFSDG AWRQVAAMPP AMSHALYGKK ADVNCVGHGG RVMVCVSSGD
501: ADANGCFMCD VGSNAWEELP RCAGGDGEAM DFVAAFSFEP RMEVAV
101: LTRTASASFL HPLPLCVFSS VRSKILDMAA ALAASGGKKR KCQELSAPEL GQLHEDMLER VLARLPPASF FRLRGVCRRW SEAAGSPAFL AACARVPSRD
201: PWFLMLSDQQ EDEQRPPCPA VAFDAAEKTW ARCRGAPGPV PVAAAGGLVL YRAPETGALT VANPLSGVSR ALPPPPPAAA PDALYAVAMY GSPYRVVLIL
301: GDLPHLSMTL FDSSKNAWED AVPLSRKTEA SPADVQAPHD DGDDDIDEDM DGDGDGAVYY LSKSGDVMVS STQRSASRQY SSAVTCRSDG GEAVAYFLSH
401: SGAVVACDLA RRVFSELPRI LPVHSEYSID VVACDGRAYV VVLSEYLDTA SLRVWEFSDG AWRQVAAMPP AMSHALYGKK ADVNCVGHGG RVMVCVSSGD
501: ADANGCFMCD VGSNAWEELP RCAGGDGEAM DFVAAFSFEP RMEVAV
001: MPSSATSTYL LSLKQVSLTA SSPLLLQLKD RFFHQPKLLN MGFSTGKRKS RDEEEDRVSF FASEFPMDDL NDDVLERVLS WLPTSCFFRM SSVCKRWKSS
101: QTSKSFKLAC SQIPTRDPWF FMIDNDSNSS SFVFDSTENS WKNLNRRDFL HHHRQDFIPV ASSGGLLCYR CSISGDFLLR NPLTGSSRDI PSQDNNNNKP
201: LQAVAMTTTT VTPSSYTLVT ISGEIPNLSF KIYESNADSW SKDQELESVK NNDSSLHDDY DTDSGTVYFL SKQGNVVVAS NNLQRSPSKQ YSSVITVTDE
301: AEIVYFLSSY GTIVACDLTK RCFTELPKLL PPFLEYSIDL VECEGTMYVI LLSEFFESAS LRIWRLDNNR EWVQVGMLPP ALSHELYGKK GDINCVGGAG
401: NKILVCFNAS PPEVYCRYFV YDLVAEEWNE LPKCFKDGEA VDFVSALSFQ PRIEATV
101: QTSKSFKLAC SQIPTRDPWF FMIDNDSNSS SFVFDSTENS WKNLNRRDFL HHHRQDFIPV ASSGGLLCYR CSISGDFLLR NPLTGSSRDI PSQDNNNNKP
201: LQAVAMTTTT VTPSSYTLVT ISGEIPNLSF KIYESNADSW SKDQELESVK NNDSSLHDDY DTDSGTVYFL SKQGNVVVAS NNLQRSPSKQ YSSVITVTDE
301: AEIVYFLSSY GTIVACDLTK RCFTELPKLL PPFLEYSIDL VECEGTMYVI LLSEFFESAS LRIWRLDNNR EWVQVGMLPP ALSHELYGKK GDINCVGGAG
401: NKILVCFNAS PPEVYCRYFV YDLVAEEWNE LPKCFKDGEA VDFVSALSFQ PRIEATV
Arabidopsis Description
F-box family protein [Source:TAIR;Acc:AT4G33160]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.