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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU90263 Sorghum cytosol, mitochondrion, plastid 86.17 84.71
Zm00001d022151_P001 Maize cytosol, mitochondrion, plastid 82.96 80.96
Os07t0617700-01 Rice cytosol 65.43 65.27
TraesCS2D01G175100.1 Wheat cytosol 66.42 64.51
TraesCS2A01G167400.1 Wheat cytosol 66.17 64.27
TraesCS2B01G193700.1 Wheat cytosol 65.43 63.86
Zm00001d029442_P001 Maize cytosol, nucleus, plastid 61.73 62.34
HORVU2Hr1G030810.1 Barley plastid 65.93 48.9
GSMUA_Achr7P11470_001 Banana nucleus 39.51 45.45
VIT_04s0008g03190.t01 Wine grape cytosol 42.47 42.26
KRH15707 Soybean cytosol 42.47 42.26
KRH05328 Soybean cytosol 42.47 42.26
GSMUA_Achr10P... Banana cytosol 41.73 41.12
CDY71979 Canola cytosol 39.51 40.61
CDX72391 Canola cytosol 39.51 40.51
Bra037018.1-P Field mustard cytosol 39.01 40.2
Solyc08g067300.1.1 Tomato nucleus 40.74 39.86
KRH61620 Soybean cytosol 40.49 39.71
KRH52288 Soybean cytosol 40.25 39.47
PGSC0003DMT400019032 Potato nucleus 40.49 39.23
CDX75335 Canola nucleus 38.27 37.99
Bra011423.1-P Field mustard nucleus 38.02 37.75
CDX68951 Canola cytosol 38.02 37.47
AT4G33160.2 Thale cress cytosol 39.01 30.5
Zm00001d043989_P001 Maize cytosol 18.52 18.66
Zm00001d053358_P001 Maize cytosol 18.52 18.52
Zm00001d011994_P001 Maize cytosol 19.51 17.83
Zm00001d016066_P001 Maize cytosol 18.27 17.83
Zm00001d046950_P001 Maize cytosol, mitochondrion, plastid 18.27 17.09
Zm00001d036653_P001 Maize plastid 18.27 16.97
Zm00001d042309_P001 Maize cytosol 19.75 16.95
Zm00001d026557_P001 Maize cytosol, mitochondrion, plastid 17.53 16.9
Zm00001d026558_P001 Maize cytosol, mitochondrion, plastid 17.53 16.9
Protein Annotations
Gene3D:1.20.1280.50EntrezGene:103647857Gene3D:2.120.10.80MapMan:35.1UniProt:A0A1D6F1Q7InterPro:F-box-like_dom_sf
InterPro:F-box_domGO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:Gal_Oxase/kelch_b-propellerInterPro:IPR001810
InterPro:IPR015915InterPro:Kelch-typ_b-propellerProteinID:ONM25373.1PFAM:PF00646PFscan:PS50181PANTHER:PTHR45094
PANTHER:PTHR45094:SF1SMART:SM00256SUPFAM:SSF50965SUPFAM:SSF81383UniParc:UPI0002211406EnsemblPlantsGene:Zm00001d006874
EnsemblPlants:Zm00001d006874_P001EnsemblPlants:Zm00001d006874_T001SEG:seg:::
Description
F-box only protein 13
Coordinates
chr2:+:218323951..218325168
Molecular Weight (calculated)
42732.6 Da
IEP (calculated)
7.764
GRAVY (calculated)
-0.123
Length
405 amino acids
Sequence
(BLAST)
001: MGPTLDGAAG GGKKRKRVPP GLADLHDDML ERVLARLPPA SYLRLRGVSR RWRAAAESST FRAACARVTA RDPWFLMLDD PDHQDEQRPR YTAAAVVFDA
101: AERAWARWRG APGPQRPVAA AGGLLLYRDP GTGDLTVVNP LTGAAHALPP PPPPALTRAL QAIAMYGAPY RVVLILGELP DLSTVAYDSS TDAWGEEAAL
201: SRKPEEEGGG GGGDGTVYFL SKSGDVVATT TQRSAARQYS SAVACGAGAD AVAYFLSRSG TVVACDLARR AFAELPRILP AHHEHSVDVA ACGGAAYAVV
301: LSEFLDAASL RVWEFARGAW RQVAAMPPAM AHAFRGAKAD VNCVGHGGRV MVCVSSSSSS ASGCFMCDVR TNRWEELPRR QGGDGDGSTG FVAALSFEPR
401: MEAAV
Best Arabidopsis Sequence Match ( AT4G33160.1 )
(BLAST)
001: MPSSATSTYL LSLKQVSLTA SSPLLLQLKD RFFHQPKLLN MGFSTGKRKS RDEEEDRVSF FASEFPMDDL NDDVLERVLS WLPTSCFFRM SSVCKRWKSS
101: QTSKSFKLAC SQIPTRDPWF FMIDNDSNSS SFVFDSTENS WKNLNRRDFL HHHRQDFIPV ASSGGLLCYR CSISGDFLLR NPLTGSSRDI PSQDNNNNKP
201: LQAVAMTTTT VTPSSYTLVT ISGEIPNLSF KIYESNADSW SKDQELESVK NNDSSLHDDY DTDSGTVYFL SKQGNVVVAS NNLQRSPSKQ YSSVITVTDE
301: AEIVYFLSSY GTIVACDLTK RCFTELPKLL PPFLEYSIDL VECEGTMYVI LLSEFFESAS LRIWRLDNNR EWVQVGMLPP ALSHELYGKK GDINCVGGAG
401: NKILVCFNAS PPEVYCRYFV YDLVAEEWNE LPKCFKDGEA VDFVSALSFQ PRIEATV
Arabidopsis Description
F-box family protein [Source:TAIR;Acc:AT4G33160]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.