Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
OQU90263 | Sorghum | cytosol, mitochondrion, plastid | 86.17 | 84.71 |
Zm00001d022151_P001 | Maize | cytosol, mitochondrion, plastid | 82.96 | 80.96 |
Os07t0617700-01 | Rice | cytosol | 65.43 | 65.27 |
TraesCS2D01G175100.1 | Wheat | cytosol | 66.42 | 64.51 |
TraesCS2A01G167400.1 | Wheat | cytosol | 66.17 | 64.27 |
TraesCS2B01G193700.1 | Wheat | cytosol | 65.43 | 63.86 |
Zm00001d029442_P001 | Maize | cytosol, nucleus, plastid | 61.73 | 62.34 |
HORVU2Hr1G030810.1 | Barley | plastid | 65.93 | 48.9 |
GSMUA_Achr7P11470_001 | Banana | nucleus | 39.51 | 45.45 |
VIT_04s0008g03190.t01 | Wine grape | cytosol | 42.47 | 42.26 |
KRH15707 | Soybean | cytosol | 42.47 | 42.26 |
KRH05328 | Soybean | cytosol | 42.47 | 42.26 |
GSMUA_Achr10P... | Banana | cytosol | 41.73 | 41.12 |
CDY71979 | Canola | cytosol | 39.51 | 40.61 |
CDX72391 | Canola | cytosol | 39.51 | 40.51 |
Bra037018.1-P | Field mustard | cytosol | 39.01 | 40.2 |
Solyc08g067300.1.1 | Tomato | nucleus | 40.74 | 39.86 |
KRH61620 | Soybean | cytosol | 40.49 | 39.71 |
KRH52288 | Soybean | cytosol | 40.25 | 39.47 |
PGSC0003DMT400019032 | Potato | nucleus | 40.49 | 39.23 |
CDX75335 | Canola | nucleus | 38.27 | 37.99 |
Bra011423.1-P | Field mustard | nucleus | 38.02 | 37.75 |
CDX68951 | Canola | cytosol | 38.02 | 37.47 |
AT4G33160.2 | Thale cress | cytosol | 39.01 | 30.5 |
Zm00001d043989_P001 | Maize | cytosol | 18.52 | 18.66 |
Zm00001d053358_P001 | Maize | cytosol | 18.52 | 18.52 |
Zm00001d011994_P001 | Maize | cytosol | 19.51 | 17.83 |
Zm00001d016066_P001 | Maize | cytosol | 18.27 | 17.83 |
Zm00001d046950_P001 | Maize | cytosol, mitochondrion, plastid | 18.27 | 17.09 |
Zm00001d036653_P001 | Maize | plastid | 18.27 | 16.97 |
Zm00001d042309_P001 | Maize | cytosol | 19.75 | 16.95 |
Zm00001d026557_P001 | Maize | cytosol, mitochondrion, plastid | 17.53 | 16.9 |
Zm00001d026558_P001 | Maize | cytosol, mitochondrion, plastid | 17.53 | 16.9 |
Protein Annotations
Gene3D:1.20.1280.50 | EntrezGene:103647857 | Gene3D:2.120.10.80 | MapMan:35.1 | UniProt:A0A1D6F1Q7 | InterPro:F-box-like_dom_sf |
InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:Gal_Oxase/kelch_b-propeller | InterPro:IPR001810 |
InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | ProteinID:ONM25373.1 | PFAM:PF00646 | PFscan:PS50181 | PANTHER:PTHR45094 |
PANTHER:PTHR45094:SF1 | SMART:SM00256 | SUPFAM:SSF50965 | SUPFAM:SSF81383 | UniParc:UPI0002211406 | EnsemblPlantsGene:Zm00001d006874 |
EnsemblPlants:Zm00001d006874_P001 | EnsemblPlants:Zm00001d006874_T001 | SEG:seg | : | : | : |
Description
F-box only protein 13
Coordinates
chr2:+:218323951..218325168
Molecular Weight (calculated)
42732.6 Da
IEP (calculated)
7.764
GRAVY (calculated)
-0.123
Length
405 amino acids
Sequence
(BLAST)
(BLAST)
001: MGPTLDGAAG GGKKRKRVPP GLADLHDDML ERVLARLPPA SYLRLRGVSR RWRAAAESST FRAACARVTA RDPWFLMLDD PDHQDEQRPR YTAAAVVFDA
101: AERAWARWRG APGPQRPVAA AGGLLLYRDP GTGDLTVVNP LTGAAHALPP PPPPALTRAL QAIAMYGAPY RVVLILGELP DLSTVAYDSS TDAWGEEAAL
201: SRKPEEEGGG GGGDGTVYFL SKSGDVVATT TQRSAARQYS SAVACGAGAD AVAYFLSRSG TVVACDLARR AFAELPRILP AHHEHSVDVA ACGGAAYAVV
301: LSEFLDAASL RVWEFARGAW RQVAAMPPAM AHAFRGAKAD VNCVGHGGRV MVCVSSSSSS ASGCFMCDVR TNRWEELPRR QGGDGDGSTG FVAALSFEPR
401: MEAAV
101: AERAWARWRG APGPQRPVAA AGGLLLYRDP GTGDLTVVNP LTGAAHALPP PPPPALTRAL QAIAMYGAPY RVVLILGELP DLSTVAYDSS TDAWGEEAAL
201: SRKPEEEGGG GGGDGTVYFL SKSGDVVATT TQRSAARQYS SAVACGAGAD AVAYFLSRSG TVVACDLARR AFAELPRILP AHHEHSVDVA ACGGAAYAVV
301: LSEFLDAASL RVWEFARGAW RQVAAMPPAM AHAFRGAKAD VNCVGHGGRV MVCVSSSSSS ASGCFMCDVR TNRWEELPRR QGGDGDGSTG FVAALSFEPR
401: MEAAV
001: MPSSATSTYL LSLKQVSLTA SSPLLLQLKD RFFHQPKLLN MGFSTGKRKS RDEEEDRVSF FASEFPMDDL NDDVLERVLS WLPTSCFFRM SSVCKRWKSS
101: QTSKSFKLAC SQIPTRDPWF FMIDNDSNSS SFVFDSTENS WKNLNRRDFL HHHRQDFIPV ASSGGLLCYR CSISGDFLLR NPLTGSSRDI PSQDNNNNKP
201: LQAVAMTTTT VTPSSYTLVT ISGEIPNLSF KIYESNADSW SKDQELESVK NNDSSLHDDY DTDSGTVYFL SKQGNVVVAS NNLQRSPSKQ YSSVITVTDE
301: AEIVYFLSSY GTIVACDLTK RCFTELPKLL PPFLEYSIDL VECEGTMYVI LLSEFFESAS LRIWRLDNNR EWVQVGMLPP ALSHELYGKK GDINCVGGAG
401: NKILVCFNAS PPEVYCRYFV YDLVAEEWNE LPKCFKDGEA VDFVSALSFQ PRIEATV
101: QTSKSFKLAC SQIPTRDPWF FMIDNDSNSS SFVFDSTENS WKNLNRRDFL HHHRQDFIPV ASSGGLLCYR CSISGDFLLR NPLTGSSRDI PSQDNNNNKP
201: LQAVAMTTTT VTPSSYTLVT ISGEIPNLSF KIYESNADSW SKDQELESVK NNDSSLHDDY DTDSGTVYFL SKQGNVVVAS NNLQRSPSKQ YSSVITVTDE
301: AEIVYFLSSY GTIVACDLTK RCFTELPKLL PPFLEYSIDL VECEGTMYVI LLSEFFESAS LRIWRLDNNR EWVQVGMLPP ALSHELYGKK GDINCVGGAG
401: NKILVCFNAS PPEVYCRYFV YDLVAEEWNE LPKCFKDGEA VDFVSALSFQ PRIEATV
Arabidopsis Description
F-box family protein [Source:TAIR;Acc:AT4G33160]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.