Factsheet for AT4G33160.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75335	Canola	nucleus	61.97	78.68
Bra011423.1-P	Field mustard	nucleus	61.39	77.94
CDX68951	Canola	cytosol	61.78	77.86
CDX72391	Canola	cytosol	59.27	77.72
CDY71979	Canola	cytosol	58.88	77.41
Bra037018.1-P	Field mustard	cytosol	58.49	77.1
KRH05328	Soybean	cytosol	43.05	54.79
KRH15707	Soybean	cytosol	42.47	54.05
KRH61620	Soybean	cytosol	42.28	53.03
VIT_04s0008g03190.t01	Wine grape	cytosol	40.54	51.6
KRH52288	Soybean	cytosol	40.93	51.33
GSMUA_Achr7P11470_001	Banana	nucleus	32.63	48.01
GSMUA_Achr10P...	Banana	cytosol	37.84	47.69
PGSC0003DMT400019032	Potato	nucleus	38.22	47.37
Solyc08g067300.1.1	Tomato	nucleus	37.07	46.38
Os03t0399400-01	Rice	mitochondrion	32.43	41.18
Zm00001d029442_P001	Maize	cytosol, nucleus, plastid	31.66	40.9
Os07t0617700-01	Rice	cytosol	31.08	39.66
OQU90263	Sorghum	cytosol, mitochondrion, plastid	31.47	39.56
TraesCS5B01G100300.1	Wheat	cytosol, plastid	30.31	39.05
KXG39191	Sorghum	nucleus	31.66	39.05
Zm00001d006874_P001	Maize	cytosol	30.5	39.01
TraesCS2A01G167400.1	Wheat	cytosol	31.27	38.85
TraesCS2D01G175100.1	Wheat	cytosol	31.27	38.85
Zm00001d022151_P001	Maize	cytosol, mitochondrion, plastid	31.08	38.8
TraesCS2B01G193700.1	Wheat	cytosol	30.89	38.55
TraesCS5D01G106500.1	Wheat	cytosol	31.85	36.67
TraesCS5A01G094200.1	Wheat	cytosol	31.08	35.62
HORVU5Hr1G025530.5	Barley	cytosol	25.29	32.27
HORVU2Hr1G030810.1	Barley	plastid	32.43	30.77
AT5G43190.1	Thale cress	mitochondrion	15.83	20.35
AT1G27340.1	Thale cress	cytosol	18.34	20.34
AT1G30950.1	Thale cress	plastid	17.18	20.14
AT5G15710.2	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	16.22	18.75
AT3G61590.4	Thale cress	plasma membrane	15.06	17.45

Protein Annotations

Gene3D:1.20.1280.50	MapMan:35.1	EntrezGene:829453	UniProt:A0A1P8B768	ProteinID:ANM67439.1	ArrayExpress:AT4G33160
EnsemblPlantsGene:AT4G33160	RefSeq:AT4G33160	TAIR:AT4G33160	RefSeq:AT4G33160-TAIR-G	EnsemblPlants:AT4G33160.2	Unigene:At.43589
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:Gal_Oxase/kelch_b-propeller
InterPro:IPR001810	RefSeq:NP_567915.4	PFAM:PF00646	PFscan:PS50181	PANTHER:PTHR45094	PANTHER:PTHR45094:SF2
SMART:SM00256	SUPFAM:SSF50965	SUPFAM:SSF81383	UniParc:UPI0008488ABF	SEG:seg	:

Description

F-box family protein [Source:TAIR;Acc:AT4G33160]

Coordinates

chr4:+:15993957..15995655

Molecular Weight (calculated)

58330.6 Da

IEP (calculated)

4.686

GRAVY (calculated)

-0.226

Length

518 amino acids

Sequence
(BLAST)

001: MFTGYSFGFG DSSEEEVAQH TIFPFLLVSL SPQEYLLCRG LSTLFDRGAQ EASLLSLSLS SMPSSATSTY LLSLKQVSLT ASSPLLLQLK DRFFHQPKLL
101: NMGFSTGKRK SRDEEEDRVS FFASEFPMDD LNDDVLERVL SWLPTSCFFR MSSVCKRWKS SQTSKSFKLA CSQIPTRDPW FFMIDNDSNS SSFVFDSTEN
201: SWKNLNRRDF LHHHRQDFIP VASSGGLLCY RCSISGDFLL RNPLTGSSRD IPSQDNNNNK PLQAVAMTTT TVTPSSYTLV TISGEIPNLS FKIYESNADS
301: WSKDQELESV KNNDSSLHDD YDTDSGTVYF LSKQGNVVVA SNNLQRSPSK QYSSVITVTD EAEIVYFLSS YGTIVACDLT KRCFTELPKL LPPFLEYSID
401: LVECEGTMYV ILLSEFFESA SLRIWRLDNN REWVQVGMLP PALSHELYGK KGDINCVGGA GNKILVCFNA SPPEVYCRYF VYDLVAEEWN ELPKCFKDGE
501: AVDFVSALSF QPRIEATV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.