Factsheet for Os07t0617700-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G175100.1	Wheat	cytosol	72.91	70.98
TraesCS2A01G167400.1	Wheat	cytosol	72.17	70.26
TraesCS2B01G193700.1	Wheat	cytosol	71.67	70.12
OQU90263	Sorghum	cytosol, mitochondrion, plastid	70.69	69.66
Os03t0399400-01	Rice	mitochondrion	67.98	67.65
Zm00001d022151_P001	Maize	cytosol, mitochondrion, plastid	67.0	65.54
Zm00001d006874_P001	Maize	cytosol	65.27	65.43
HORVU2Hr1G030810.1	Barley	plastid	72.17	53.66
GSMUA_Achr7P11470_001	Banana	nucleus	41.13	47.44
KRH15707	Soybean	cytosol	45.81	45.7
GSMUA_Achr10P...	Banana	cytosol	45.81	45.26
KRH05328	Soybean	cytosol	44.83	44.72
VIT_04s0008g03190.t01	Wine grape	cytosol	43.6	43.49
KRH52288	Soybean	cytosol	42.61	41.89
KRH61620	Soybean	cytosol	42.12	41.4
CDX72391	Canola	cytosol	40.15	41.27
CDY71979	Canola	cytosol	39.16	40.36
Bra037018.1-P	Field mustard	cytosol	38.67	39.95
Solyc08g067300.1.1	Tomato	nucleus	39.41	38.65
PGSC0003DMT400019032	Potato	nucleus	39.41	38.28
Bra011423.1-P	Field mustard	nucleus	38.42	38.24
CDX75335	Canola	nucleus	38.18	37.99
CDX68951	Canola	cytosol	38.42	37.96
AT4G33160.2	Thale cress	cytosol	39.66	31.08
Os06t0665400-01	Rice	plastid	20.69	19.58
Os04t0668600-01	Rice	plastid	19.95	19.29
Os01t0923900-01	Rice	cytosol	20.94	19.19
Os01t0659900-01	Rice	cytosol	18.23	18.0
Os02t0260200-01	Rice	cytosol, endoplasmic reticulum	17.24	17.16

Protein Annotations

Gene3D:1.20.1280.50	MapMan:35.1	EntrezGene:4343915	ProteinID:BAC16024.1	ProteinID:BAC21501.1	ProteinID:BAF22197.1
ProteinID:BAT02664.1	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842
GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0031146	InterPro:Gal_Oxase/kelch_b-propeller
InterPro:IPR001810	EnsemblPlantsGene:Os07g0617700	EnsemblPlants:Os07t0617700-01	PFAM:PF00646	PANTHER:PTHR45094	PANTHER:PTHR45094:SF1
UniProt:Q8GSA3	SMART:SM00256	SUPFAM:SSF50965	SUPFAM:SSF81383	UniParc:UPI00000AE4C0	RefSeq:XP_015645593.1
SEG:seg	:	:	:	:	:

Description

F-box protein 397Cyclin-like F-box domain containing protein. (Os07t0617700-01)

Coordinates

chr7:+:25488479..25489870

Molecular Weight (calculated)

42652.7 Da

IEP (calculated)

5.287

GRAVY (calculated)

-0.011

Length

406 amino acids

Sequence
(BLAST)

001: MAAAVVARCG GAKKRKGEGL GEMHDDVLER VLARLPPASY FRLRGVCRRW SDAASSPTFL AACGRVPARD PWFLMLSEGE GQERRLPAVA FDAGEGEWAR
101: CGGAPGHVMP VVAASGGRVL YRAPDTGELT VANPLTGASR VLPAPPPGAA LHAVAMYGSS PYRVVLITGD LPDLSMTVFD SSKNAWDDAV ALSRKPDASS
201: PERDAEGGVG GGGGGGDDET VYFLSKSGDV MATNMQRSAS RQYSSAVTCG DGGEAVAYFL SNSGAVVACE LSRRAFAELP RILPVYFEYS IDVVACGGRA
301: YVVVLSELLG TASLRLWEFA GGAWRQVAAM PPAMSHAFHG KKADVNCVGH GDRVMVCVSS GEANGCFMCD VPTNRWEELP PCAGAGGEPM DFVAAFSFEP
401: RMEVTV

Best Arabidopsis Sequence Match ( AT4G33160.1 )
(BLAST)

001: MPSSATSTYL LSLKQVSLTA SSPLLLQLKD RFFHQPKLLN MGFSTGKRKS RDEEEDRVSF FASEFPMDDL NDDVLERVLS WLPTSCFFRM SSVCKRWKSS
101: QTSKSFKLAC SQIPTRDPWF FMIDNDSNSS SFVFDSTENS WKNLNRRDFL HHHRQDFIPV ASSGGLLCYR CSISGDFLLR NPLTGSSRDI PSQDNNNNKP
201: LQAVAMTTTT VTPSSYTLVT ISGEIPNLSF KIYESNADSW SKDQELESVK NNDSSLHDDY DTDSGTVYFL SKQGNVVVAS NNLQRSPSKQ YSSVITVTDE
301: AEIVYFLSSY GTIVACDLTK RCFTELPKLL PPFLEYSIDL VECEGTMYVI LLSEFFESAS LRIWRLDNNR EWVQVGMLPP ALSHELYGKK GDINCVGGAG
401: NKILVCFNAS PPEVYCRYFV YDLVAEEWNE LPKCFKDGEA VDFVSALSFQ PRIEATV

Arabidopsis Description

F-box family protein [Source:TAIR;Acc:AT4G33160]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.