Factsheet for Os04t0668600-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11618	Sorghum	plastid	87.86	87.44
Zm00001d026558_P001	Maize	cytosol, mitochondrion, plastid	86.9	86.9
Zm00001d026557_P001	Maize	cytosol, mitochondrion, plastid	86.9	86.9
GSMUA_Achr1P09520_001	Banana	cytosol	68.33	82.23
TraesCS2D01G541700.1	Wheat	mitochondrion	78.57	80.29
HORVU2Hr1G118340.2	Barley	cytosol	61.67	69.07
KRH45144	Soybean	cytosol, plastid	71.9	68.95
PGSC0003DMT400003737	Potato	cytosol	70.95	68.04
Solyc02g089310.1.1	Tomato	cytosol, plastid	70.71	67.81
VIT_14s0083g00810.t01	Wine grape	cytosol	70.48	67.73
Bra006317.1-P	Field mustard	cytosol, plastid	69.29	66.9
CDX70633	Canola	cytosol, plastid	69.05	66.82
CDX78648	Canola	cytosol, plastid	69.05	66.67
KRH01425	Soybean	cytosol	69.76	64.82
AT5G15710.2	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	69.05	64.73
Os02t0260200-01	Rice	cytosol, endoplasmic reticulum	22.38	23.04
Os01t0923900-01	Rice	cytosol	22.86	21.67
Os01t0659900-01	Rice	cytosol	21.19	21.65
Os07t0617700-01	Rice	cytosol	19.29	19.95
Os03t0399400-01	Rice	mitochondrion	19.29	19.85
Os06t0665400-01	Rice	plastid	20.0	19.58

Protein Annotations

Gene3D:1.20.1280.50	MapMan:19.2.2.8.1.4.6	Gene3D:2.120.10.80	EntrezGene:4337336	ProteinID:BAS91534.1	ProteinID:CAE02808.1
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488
GO:GO:0005515	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0031146	InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR001810
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	EnsemblPlantsGene:Os04g0668600	EnsemblPlants:Os04t0668600-01	PFAM:PF00646	PFscan:PS50181
PANTHER:PTHR45291	UniProt:Q7XR72	SMART:SM00256	SUPFAM:SSF50965	SUPFAM:SSF81383	UniParc:UPI00001B15C5
RefSeq:XP_015635500.1	SEG:seg	:	:	:	:

Description

F-box protein 237Kelch-type beta propeller domain containing protein. (Os04t0668600-01)

Coordinates

chr4:+:34110319..34112130

Molecular Weight (calculated)

46678.5 Da

IEP (calculated)

9.368

GRAVY (calculated)

-0.020

Length

420 amino acids

Sequence
(BLAST)

001: MGDAAAPPAA VAAAARAARP TSPSRPPKAI RSTKPRGLDE ETAAPAAATF PSIKAPSAAA ASLLHADVPM EARVWAPLPD DLLLEVLARV PPFLLFRLRP
101: VSRRWDSILH DPAFLAAHAG VPSHGPCLLT FWRGAASSPP QCSVLSLPLR ARYKLPFGFL PAWDLWLVGS SGGLVCFSGF DGAGFRTVVC NPLTQTWRVL
201: PDMHYNQQRQ LVLAVDKKRR SFKVIAASDV YGDKTLPTEV YDSKENKWSV HQMMPAANLC SSKMAFCDSR LYLETLSPLG LMMYRVDAGN WEHIPAKFPR
301: SLLDGYLVAG ARTRLFLVGR IGLYSTLQSM RIWELDHGRT VWVEISRMPP KYFRALLRLS AERFECFGQD NLICFTSWNQ GKGLLYDVDK KAWSWIAGCA
401: SQLCNSQICF YEPRFDTLIY

Best Arabidopsis Sequence Match ( AT5G15710.2 )
(BLAST)

001: MERLGFWGLL MGSVEKSLDS GNSLACSASA KNGDEESSTS SKQVSPLKGS GSRNTSPLGR VGSRNTSPSR QKVVKTKPRG LEEETVASFG KQVVADVQME
101: DGIWAMLPED LLNEILARVP PFMIFRIRSV CKKWNLILQD NSFLKFHSNV SSHGPCLLTF WKNSPQIPQC SVFSLPLKTW YKIPFTFLPP WAFWLVGSSG
201: GLVCFSGLDG LTFRTLVCNP LMQSWRTLPS MHYNQQRQLI MVVDRSDKSF KVIATSDIYG DKSLPTEVYD SKTDKWSLHQ IMPAVNLCSS KMAYCDSRLY
301: LETLSPLGLM MYRLDSGQWE HIPAKFPRSL LDGYLVAGTQ KRLFLVGRIG LYSTLQSMRI WELDHTKVSW VEISRMPPKY FRALLRLSAE RFECFGQDNL
401: ICFTSWNQGK GLLYNVDKKI WSWISGCALQ SCNSQVCFYE PRFDASVL

Arabidopsis Description

F-box/kelch-repeat protein At5g15710 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFV5]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.