Factsheet for AT5G15710.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, plastid, cytosol, plasma membrane, golgi, nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome, plastid, secretory
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78648	Canola	cytosol, plastid	90.85	93.56
Bra006317.1-P	Field mustard	cytosol, plastid	90.4	93.1
CDX70633	Canola	cytosol, plastid	90.18	93.09
GSMUA_Achr1P09520_001	Banana	cytosol	66.07	84.81
Solyc02g089310.1.1	Tomato	cytosol, plastid	82.14	84.02
PGSC0003DMT400003737	Potato	cytosol	82.14	84.02
VIT_14s0083g00810.t01	Wine grape	cytosol	81.7	83.75
KRH45144	Soybean	cytosol, plastid	80.13	81.96
KRH01425	Soybean	cytosol	79.69	78.98
Os04t0668600-01	Rice	plastid	64.73	69.05
EES11618	Sorghum	plastid	63.84	67.77
Zm00001d026558_P001	Maize	cytosol, mitochondrion, plastid	62.95	67.14
Zm00001d026557_P001	Maize	cytosol, mitochondrion, plastid	62.95	67.14
TraesCS2D01G541700.1	Wheat	mitochondrion	60.71	66.18
HORVU2Hr1G118340.2	Barley	cytosol	50.89	60.8
AT1G30950.1	Thale cress	plastid	23.21	23.53
AT3G61590.4	Thale cress	plasma membrane	23.21	23.27
AT1G27340.1	Thale cress	cytosol	22.99	22.06
AT5G43190.1	Thale cress	mitochondrion	18.97	21.09
AT4G33160.2	Thale cress	cytosol	18.75	16.22

Protein Annotations

Gene3D:1.20.1280.50	MapMan:19.2.2.8.1.4.6	Gene3D:2.120.10.80	EntrezGene:831425	UniProt:A0A178UII0	ProteinID:AED92195.1
EMBL:AK229249	ProteinID:ANM69440.1	ArrayExpress:AT5G15710	EnsemblPlantsGene:AT5G15710	RefSeq:AT5G15710	TAIR:AT5G15710
RefSeq:AT5G15710-TAIR-G	EnsemblPlants:AT5G15710.2	Unigene:At.31763	EMBL:BT011243	EMBL:BT012539	ProteinID:CAC01770.1
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488
GO:GO:0005515	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0031146	InterPro:IPR001810	InterPro:IPR015915
InterPro:Kelch-typ_b-propeller	RefSeq:NP_001318570.1	RefSeq:NP_197075.1	ProteinID:OAO93628.1	PFAM:PF00646	PFscan:PS50181
PANTHER:PTHR45291	UniProt:Q9LFV5	SMART:SM00256	SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI00000A46B5

Description

F-box/kelch-repeat protein At5g15710 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFV5]

Coordinates

chr5:+:5122428..5124467

Molecular Weight (calculated)

50732.4 Da

IEP (calculated)

9.127

GRAVY (calculated)

-0.161

Length

448 amino acids

Sequence
(BLAST)

001: MERLGFWGLL MGSVEKSLDS GNSLACSASA KNGDEESSTS SKQVSPLKGS GSRNTSPLGR VGSRNTSPSR QKVVKTKPRG LEEETVASFG KQVVADVQME
101: DGIWAMLPED LLNEILARVP PFMIFRIRSV CKKWNLILQD NSFLKFHSNV SSHGPCLLTF WKNSPQIPQC SVFSLPLKTW YKIPFTFLPP WAFWLVGSSG
201: GLVCFSGLDG LTFRTLVCNP LMQSWRTLPS MHYNQQRQLI MVVDRSDKSF KVIATSDIYG DKSLPTEVYD SKTDKWSLHQ IMPAVNLCSS KMAYCDSRLY
301: LETLSPLGLM MYRLDSGQWE HIPAKFPRSL LDGYLVAGTQ KRLFLVGRIG LYSTLQSMRI WELDHTKVSW VEISRMPPKY FRALLRLSAE RFECFGQDNL
401: ICFTSWNQGK GLLYNVDKKI WSWISGCALQ SCNSQVCFYE PRFDASVL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.