Factsheet for AT1G30950.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY12448	Canola	plastid	92.31	91.48
CDY52183	Canola	plastid	92.31	91.48
Bra039878.1-P	Field mustard	plastid	91.63	91.01
KRH58532	Soybean	plastid	65.38	67.21
VIT_01s0011g01220.t01	Wine grape	plastid	66.29	67.2
KRH42420	Soybean	plastid	64.48	64.77
Solyc02g081670.1.1	Tomato	plastid	59.28	57.58
PGSC0003DMT400045739	Potato	plastid	59.28	57.21
GSMUA_Achr3P23630_001	Banana	plastid	44.57	51.57
Os06t0665400-01	Rice	plastid	41.86	43.12
Zm00001d046950_P001	Maize	cytosol, mitochondrion, plastid	41.86	42.73
OQU76836	Sorghum	plastid	41.63	42.69
TraesCS7A01G481600.1	Wheat	plastid	42.31	42.5
HORVU7Hr1G108970.1	Barley	cytosol, plasma membrane, plastid	42.08	42.47
TraesCS7D01G468700.1	Wheat	plastid	42.08	42.27
Zm00001d036653_P001	Maize	plastid	41.4	41.97
TraesCS7B01G384000.1	Wheat	extracellular, plasma membrane, plastid	42.08	38.51
AT5G15710.2	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	23.53	23.21
AT3G61590.4	Thale cress	plasma membrane	20.36	20.13
AT1G27340.1	Thale cress	cytosol	21.04	19.91
AT5G43190.1	Thale cress	mitochondrion	17.19	18.86
AT4G33160.2	Thale cress	cytosol	20.14	17.18

Protein Annotations

MapMan:19.2.2.8.1.4.3	Gene3D:3.80.10.10	EntrezGene:839982	ProteinID:AAF98199.1	EMBL:AB493487	ProteinID:AEE31296.1
ArrayExpress:AT1G30950	EnsemblPlantsGene:AT1G30950	RefSeq:AT1G30950	TAIR:AT1G30950	RefSeq:AT1G30950-TAIR-G	EnsemblPlants:AT1G30950.1
TAIR:AT1G30950.1	UniProt:C0SUY4	ProteinID:CAA61508.1	EMBL:DQ056469	InterPro:F-box-like_dom_sf	InterPro:F-box_dom
GO:GO:0000003	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0006464	GO:GO:0007275	GO:GO:0008134	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009058	GO:GO:0009791	GO:GO:0009908	GO:GO:0009987	GO:GO:0016567
GO:GO:0016740	GO:GO:0019538	GO:GO:0030154	GO:GO:0031146	InterPro:IPR001810	InterPro:IPR015915
InterPro:IPR032675	InterPro:Kelch-typ_b-propeller	InterPro:LRR_dom_sf	RefSeq:NP_564368.1	PFAM:PF00646	PO:PO:0000037
PO:PO:0000229	PO:PO:0001078	PO:PO:0004507	PO:PO:0007611	PO:PO:0009009	PO:PO:0009010
PO:PO:0009046	PFscan:PS50181	PANTHER:PTHR45371	UniProt:Q39090	SMART:SM00256	SUPFAM:SSF117281
SUPFAM:SSF81383	Symbol:UFO	UniParc:UPI00000A59F3	SEG:seg	:	:

Description

UFOUncharacterized protein At1g30950 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUY4]

Coordinates

chr1:+:11035992..11037508

Molecular Weight (calculated)

49049.9 Da

IEP (calculated)

8.442

GRAVY (calculated)

0.001

Length

442 amino acids

Sequence
(BLAST)

001: MDSTVFINNP SLTLPFSYTF TSSSNSSTTT STTTDSSSGQ WMDGRIWSKL PPPLLDRVIA FLPPPAFFRT RCVCKRFYSL LFSNTFLETY LQLLPLRHNC
101: FLFFKHKTLK SYIYKRGGTN DDDSNKAEGF LFDPNEIRWY RLSFAYIPSG FYPSGSSGGL VSWVSEEAGL KTILLCNPLV GSVSQLPPIS RPRLFPSIGL
201: SVTPTSIDVT VAGDDLISPY AVKNLSSESF HVDAGGFFSL WAMTSSLPRL CSLESGKMVY VQGKFYCMNY SPFSVLSYEV TGNRWIKIQA PMRRFLRSPS
301: LLESKGRLIL VAAVEKSKLN VPKSLRLWSL QQDNATWVEI ERMPQPLYTQ FAAEEGGKGF ECVGNQEFVM IVLRGTSLQL LFDIVRKSWL WVPPCPYSGS
401: GGGSSGGGSD GEVLQGFAYD PVLTTPVVSL LDQLTLPFPG VC

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.