Factsheet for HORVU7Hr1G108970.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

cytosol 1
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, plastid
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G018470.1
HORVU0Hr1G025410.1
HORVU0Hr1G029090.1
HORVU1Hr1G008160.1
HORVU1Hr1G048620.1
HORVU2Hr1G056160.5
HORVU2Hr1G067660.1
HORVU2Hr1G074740.2
HORVU2Hr1G074780.1
HORVU2Hr1G112000.1
HORVU3Hr1G021300.1
HORVU3Hr1G054660.1
HORVU3Hr1G098530.4
HORVU3Hr1G113750.1
HORVU4Hr1G047410.2
HORVU4Hr1G048730.1
HORVU4Hr1G070980.1
HORVU4Hr1G086160.1
HORVU6Hr1G023630.1
HORVU6Hr1G027500.11
HORVU7Hr1G049190.1
HORVU7Hr1G078010.1
HORVU7Hr1G091210.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G30950.1	HORVU0Hr1G018470.1	AT1G22920.1	12724534
AT1G30950.1	HORVU0Hr1G025410.1	AT1G22920.1	12724534
AT1G30950.1	HORVU1Hr1G008160.1	AT1G22920.1	12724534
AT1G30950.1	HORVU2Hr1G056160.5	AT1G22920.1	12724534
AT1G30950.1	HORVU2Hr1G067660.1	AT1G22920.1	12724534
AT1G30950.1	HORVU2Hr1G112000.1	AT1G22920.1	12724534
AT1G30950.1	HORVU3Hr1G021300.1	AT1G22920.1	12724534
AT1G30950.1	HORVU3Hr1G054660.1	AT1G22920.1	12724534
AT1G30950.1	HORVU3Hr1G113750.1	AT1G22920.1	12724534
AT1G30950.1	HORVU4Hr1G047410.2	AT1G22920.1	12724534
AT1G30950.1	HORVU4Hr1G048730.1	AT1G22920.1	12724534
AT1G30950.1	HORVU6Hr1G023630.1	AT1G22920.1	12724534
AT1G30950.1	HORVU7Hr1G078010.1	AT1G22920.1	12724534
AT1G30950.1	HORVU7Hr1G091210.4	AT3G54340.1	18287201
AT1G30950.1	HORVU0Hr1G029090.1	AT3G61140.1	12724534
AT1G30950.1	HORVU1Hr1G048620.1	AT3G61140.1	12724534
AT1G30950.1	HORVU4Hr1G086160.1	AT3G61140.1	12724534
AT1G30950.1	HORVU6Hr1G027500.11	AT3G61140.1	12724534
AT1G30950.1	HORVU3Hr1G098530.4	AT4G02570.1	12724534
AT1G30950.1	HORVU2Hr1G074740.2	AT4G14110.1	12724534
AT1G30950.1	HORVU2Hr1G074780.1	AT4G14110.1	12724534
AT1G30950.1	HORVU4Hr1G070980.1	AT5G42970.1	12724534
AT1G30950.1	HORVU7Hr1G049190.1	AT5G56280.1	12724534

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G468700.1	Wheat	plastid	93.84	93.41
TraesCS7A01G481600.1	Wheat	plastid	93.61	93.18
TraesCS7B01G384000.1	Wheat	extracellular, plasma membrane, plastid	94.29	85.51
Os06t0665400-01	Rice	plastid	79.91	81.59
OQU76836	Sorghum	plastid	78.08	79.35
Zm00001d046950_P001	Maize	cytosol, mitochondrion, plastid	78.31	79.21
Zm00001d036653_P001	Maize	plastid	78.77	79.13
GSMUA_Achr3P23630_001	Banana	plastid	44.98	51.57
KRH58532	Soybean	plastid	43.38	44.19
VIT_01s0011g01220.t01	Wine grape	plastid	43.38	43.58
KRH42420	Soybean	plastid	43.15	42.95
AT1G30950.1	Thale cress	plastid	42.47	42.08
CDY52183	Canola	plastid	42.01	41.26
CDY12448	Canola	plastid	42.01	41.26
Bra039878.1-P	Field mustard	plastid	41.32	40.67
Solyc02g081670.1.1	Tomato	plastid	41.78	40.22
PGSC0003DMT400045739	Potato	plastid	41.78	39.96
HORVU3Hr1G059460.1	Barley	cytosol	17.58	19.15
HORVU2Hr1G118340.2	Barley	cytosol	14.84	17.33
HORVU2Hr1G030810.1	Barley	plastid	18.26	14.65
HORVU5Hr1G025530.5	Barley	cytosol	13.47	14.53

Protein Annotations

Gene3D:1.20.1280.50	MapMan:19.2.2.8.1.4.3	UniProt:A0A287XRQ4	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515	GO:GO:0006139	GO:GO:0006355
GO:GO:0006464	GO:GO:0008134	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	GO:GO:0019538	GO:GO:0031146	InterPro:Gal_Oxase/kelch_b-propeller	EnsemblPlantsGene:HORVU7Hr1G108970
EnsemblPlants:HORVU7Hr1G108970.1	InterPro:IPR001810	PFAM:PF00646	PFscan:PS50181	PANTHER:PTHR45371	SMART:SM00256
SUPFAM:SSF50965	SUPFAM:SSF81383	UniParc:UPI000B47307E	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr7H:+:626595595..626597216

Molecular Weight (calculated)

45990.7 Da

IEP (calculated)

10.810

GRAVY (calculated)

0.224

Length

438 amino acids

Sequence
(BLAST)

001: QAHHHLPLPS GPGRRPSTAA AAEVEMDPRV WRRLPQPLLD RVLACLPTPS FLRARAVCRR FYHLLFSSPF LHSHLLHSPH LPFFAFAVPS AGHLLLLDPT
101: PQPQGPSWFL LPLPIPAPAA GFSPAAASAG LLAFLSDASG HKTLLLANPI TRLLAALPLG PTQRLSPTVG LAAGSTSIIA VVAGDDLVSP FAVKNISVDT
201: FVADAASVPS PGFWTPSSLL PRLSSLDPRA GMAFVAGRFY CMSSSPFAVL VFDVAGNAWS KVQPPMRRFL RSPALVELGG GREGPGSARV GLVASVEKSR
301: LNVPRSVRVW TLRGRGASGG GGGAWSEVAR MPQDVHAQFA VAEGGRGFEC AAHGDFIVLA PRSGPAAVPV PTTVLVFDSR RDEWRWAPPC PYVGHGLAAV
401: VAGGGTGFRV LAYEPRLATP AIGLLDATTP VALHGMHG

Best Arabidopsis Sequence Match ( AT1G30950.1 )
(BLAST)

001: MDSTVFINNP SLTLPFSYTF TSSSNSSTTT STTTDSSSGQ WMDGRIWSKL PPPLLDRVIA FLPPPAFFRT RCVCKRFYSL LFSNTFLETY LQLLPLRHNC
101: FLFFKHKTLK SYIYKRGGTN DDDSNKAEGF LFDPNEIRWY RLSFAYIPSG FYPSGSSGGL VSWVSEEAGL KTILLCNPLV GSVSQLPPIS RPRLFPSIGL
201: SVTPTSIDVT VAGDDLISPY AVKNLSSESF HVDAGGFFSL WAMTSSLPRL CSLESGKMVY VQGKFYCMNY SPFSVLSYEV TGNRWIKIQA PMRRFLRSPS
301: LLESKGRLIL VAAVEKSKLN VPKSLRLWSL QQDNATWVEI ERMPQPLYTQ FAAEEGGKGF ECVGNQEFVM IVLRGTSLQL LFDIVRKSWL WVPPCPYSGS
401: GGGSSGGGSD GEVLQGFAYD PVLTTPVVSL LDQLTLPFPG VC

Arabidopsis Description

UFOUncharacterized protein At1g30950 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUY4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.