Factsheet for Solyc02g081670.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 3
cytosol 1
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g091650.2.1
Solyc01g099290.2.1
Solyc01g104600.2.1
Solyc04g080160.2.1
Solyc04g081000.2.1
Solyc06g073150.2.1
Solyc10g005660.2.1
Solyc11g017300.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G30950.1	Solyc06g073150.2.1	AT1G22920.1	12724534
AT1G30950.1	Solyc11g017300.1.1	AT1G22920.1	12724534
AT1G30950.1	Solyc04g081000.2.1	AT3G54340.1	18287201
AT1G30950.1	Solyc01g091650.2.1	AT3G61140.1	12724534
AT1G30950.1	Solyc01g099290.2.1	AT4G02570.1	12724534
AT1G30950.1	Solyc01g104600.2.1	AT4G14110.1	12724534
AT1G30950.1	Solyc04g080160.2.1	AT5G42970.1	12724534
AT1G30950.1	Solyc10g005660.2.1	AT5G56280.1	12724534

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400045739	Potato	plastid	97.14	96.51
VIT_01s0011g01220.t01	Wine grape	plastid	68.13	71.1
KRH58532	Soybean	plastid	64.62	68.37
KRH42420	Soybean	plastid	63.96	66.14
AT1G30950.1	Thale cress	plastid	57.58	59.28
CDY52183	Canola	plastid	57.58	58.74
CDY12448	Canola	plastid	57.36	58.52
Bra039878.1-P	Field mustard	plastid	57.14	58.43
GSMUA_Achr3P23630_001	Banana	plastid	46.37	55.24
Os06t0665400-01	Rice	plastid	39.78	42.19
HORVU7Hr1G108970.1	Barley	cytosol, plasma membrane, plastid	40.22	41.78
Zm00001d036653_P001	Maize	plastid	39.78	41.51
OQU76836	Sorghum	plastid	39.12	41.3
Zm00001d046950_P001	Maize	cytosol, mitochondrion, plastid	39.12	41.11
TraesCS7D01G468700.1	Wheat	plastid	39.56	40.91
TraesCS7A01G481600.1	Wheat	plastid	39.34	40.68
TraesCS7B01G384000.1	Wheat	extracellular, plasma membrane, plastid	39.34	37.06
Solyc01g095370.2.1	Tomato	cytosol	20.66	23.27
Solyc02g089310.1.1	Tomato	cytosol, plastid	21.54	22.37
Solyc05g015520.2.1	Tomato	cytosol	20.44	19.96
Solyc08g067300.1.1	Tomato	nucleus	16.48	18.12

Protein Annotations

Gene3D:1.20.1280.50	MapMan:19.2.2.8.1.4.3	UniProt:B6E0Z0	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	EMBL:FJ190668
GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515	GO:GO:0006139
GO:GO:0006355	GO:GO:0006464	GO:GO:0008134	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0031146
InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR001810	PFAM:PF00646	PFscan:PS50181	PANTHER:PTHR45371	SMART:SM00256
SUPFAM:SSF50965	SUPFAM:SSF81383	EnsemblPlantsGene:Solyc02g081670.1	EnsemblPlants:Solyc02g081670.1.1	UniParc:UPI000181C837	SEG:seg

Description

Protein UNUSUAL FLORAL ORGANS [Source:Projected from Arabidopsis thaliana (AT1G30950) UniProtKB/Swiss-Prot;Acc:Q39090]

Coordinates

chr2:+:45542385..45543752

Molecular Weight (calculated)

51037.7 Da

IEP (calculated)

8.465

GRAVY (calculated)

0.043

Length

455 amino acids

Sequence
(BLAST)

001: MEAFHHPPIS FHFPYAFPIP TPTTNFLGTP NSSSVNGMII NTWMDSRIWS RLPHRLIDRI IAFLPPPAFF RARVVCKRFY GLIYSTHFLE LYLQVSPKRN
101: WFIFFKQKVP RNNIYKNVMN SSNSGVCSVE GYLFDPDNLC WYRLSFALIP QGFSPVSSSG GLICFVSDES GSKNILLCNP LVGSIIPLPP TLRPRLFPSI
201: GLTITNTSID IAVAGDDLIS PYAVKNLTTE SFHIDGNGFY SIWGTTSTLP RLCSFESGKM VHVQGRFYCM NFSPFSVLSY DIGTNNWCKI QAPMRRFLRS
301: PSLVEGNGKV VLVAAVEKSK LNVPRSLRLW ALQDCGTMWL EIERMPQQLY VQFAEVENGQ GFSCVGHGEY VVIMIKNNSD KALLFDFCKK RWIWIPPCPF
401: LGNNLDYGGV GSSNNYCGEF GVGGGELHGF GYDPRLAAPI GALLDQLTLP FQSFN

Best Arabidopsis Sequence Match ( AT1G30950.1 )
(BLAST)

001: MDSTVFINNP SLTLPFSYTF TSSSNSSTTT STTTDSSSGQ WMDGRIWSKL PPPLLDRVIA FLPPPAFFRT RCVCKRFYSL LFSNTFLETY LQLLPLRHNC
101: FLFFKHKTLK SYIYKRGGTN DDDSNKAEGF LFDPNEIRWY RLSFAYIPSG FYPSGSSGGL VSWVSEEAGL KTILLCNPLV GSVSQLPPIS RPRLFPSIGL
201: SVTPTSIDVT VAGDDLISPY AVKNLSSESF HVDAGGFFSL WAMTSSLPRL CSLESGKMVY VQGKFYCMNY SPFSVLSYEV TGNRWIKIQA PMRRFLRSPS
301: LLESKGRLIL VAAVEKSKLN VPKSLRLWSL QQDNATWVEI ERMPQPLYTQ FAAEEGGKGF ECVGNQEFVM IVLRGTSLQL LFDIVRKSWL WVPPCPYSGS
401: GGGSSGGGSD GEVLQGFAYD PVLTTPVVSL LDQLTLPFPG VC

Arabidopsis Description

UFOUncharacterized protein At1g30950 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUY4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.