CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
EER90370
EER92695
EER92981
EES04173
EES14305
KXG27287
OQU81583

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G30950.1	KXG27287	AT1G22920.1	12724534
AT1G30950.1	EER90370	AT3G54340.1	18287201
AT1G30950.1	EER92981	AT3G61140.1	12724534
AT1G30950.1	EES04173	AT4G02570.1	12724534
AT1G30950.1	OQU81583	AT4G14110.1	12724534
AT1G30950.1	EER92695	AT5G42970.1	12724534
AT1G30950.1	EES14305	AT5G56280.1	12724534

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046950_P001	Maize	cytosol, mitochondrion, plastid	94.43	94.0
Os06t0665400-01	Rice	plastid	83.53	83.92
TraesCS7A01G481600.1	Wheat	plastid	80.28	78.64
TraesCS7D01G468700.1	Wheat	plastid	79.81	78.18
HORVU7Hr1G108970.1	Barley	cytosol, plasma membrane, plastid	79.35	78.08
TraesCS7B01G384000.1	Wheat	extracellular, plasma membrane, plastid	80.74	72.05
GSMUA_Achr3P23630_001	Banana	plastid	45.71	51.57
KRH58532	Soybean	plastid	42.23	42.33
AT1G30950.1	Thale cress	plastid	42.69	41.63
VIT_01s0011g01220.t01	Wine grape	plastid	42.0	41.51
KRH42420	Soybean	plastid	42.0	41.14
CDY12448	Canola	plastid	41.53	40.13
CDY52183	Canola	plastid	41.53	40.13
Bra039878.1-P	Field mustard	plastid	41.3	40.0
Solyc02g081670.1.1	Tomato	plastid	41.3	39.12
PGSC0003DMT400045739	Potato	plastid	41.3	38.86
EES01202	Sorghum	cytosol	19.49	20.69
EES11618	Sorghum	plastid	20.19	20.62
KXG39191	Sorghum	nucleus	17.63	18.1
OQU90263	Sorghum	cytosol, mitochondrion, plastid	17.17	17.96
EES04122	Sorghum	cytosol	18.33	17.87
KXG29968	Sorghum	cytosol	16.24	17.16

Protein Annotations

MapMan:19.2.2.8.1.4.3	UniProt:A0A1W0VU93	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0004842	GO:GO:0005488	GO:GO:0005515	GO:GO:0006139	GO:GO:0006355	GO:GO:0006464
GO:GO:0008134	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987
GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0031146	InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR001810
EnsemblPlants:OQU76836	ProteinID:OQU76836	ProteinID:OQU76836.1	PFscan:PS50181	PANTHER:PTHR45371	SMART:SM00256
EnsemblPlantsGene:SORBI_3010G220400	SUPFAM:SSF50965	SUPFAM:SSF81383	UniParc:UPI0009DC82FF	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:-:56254112..56255950

Molecular Weight (calculated)

45800.4 Da

IEP (calculated)

9.793

GRAVY (calculated)

0.197

Length

431 amino acids

Sequence
(BLAST)

001: MMHHHPQFLL PRLHSPSSSS SSEAVDMDPR VWGRLPQPLV DRVLACLPTP SFLRLRAACR RFCNLIYSSP FLHSHLLLSP HLPFFAFAVP SAGYLLLLDP
101: TRPEAPSWSR LPLPLPAAPG AGHQAFSPAA ASAGLLAFLS DASGHKTLLL ANPITRLLAP LPLCPTARLS PTVGLAAGPT SFIAVIAGDD LVSPFAVKNI
201: SADTFVADAA SVPPSGFWAP SSILPRLSSL DPRAGMAFAS GRFYCMSSSP FAVLVFDVAT NVWSKVQPPM RRFLRSPALV EFGGGREREA RVALVSAVEK
301: SRLSVPRSVR VWTLRGGSNG GSGAWTEMAR MPPDVHAQFA AAEGGRGFEC AAHGDFVVLA PRGPAIPVLV FDSRRDEWRW APPCPYPPYA GGIAAGGAGF
401: RVFAYEPRLA TPAIGLLDAT APAAFLHGMQ G

Best Arabidopsis Sequence Match ( AT1G30950.1 )
(BLAST)

001: MDSTVFINNP SLTLPFSYTF TSSSNSSTTT STTTDSSSGQ WMDGRIWSKL PPPLLDRVIA FLPPPAFFRT RCVCKRFYSL LFSNTFLETY LQLLPLRHNC
101: FLFFKHKTLK SYIYKRGGTN DDDSNKAEGF LFDPNEIRWY RLSFAYIPSG FYPSGSSGGL VSWVSEEAGL KTILLCNPLV GSVSQLPPIS RPRLFPSIGL
201: SVTPTSIDVT VAGDDLISPY AVKNLSSESF HVDAGGFFSL WAMTSSLPRL CSLESGKMVY VQGKFYCMNY SPFSVLSYEV TGNRWIKIQA PMRRFLRSPS
301: LLESKGRLIL VAAVEKSKLN VPKSLRLWSL QQDNATWVEI ERMPQPLYTQ FAAEEGGKGF ECVGNQEFVM IVLRGTSLQL LFDIVRKSWL WVPPCPYSGS
401: GGGSSGGGSD GEVLQGFAYD PVLTTPVVSL LDQLTLPFPG VC

Arabidopsis Description

UFOUncharacterized protein At1g30950 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUY4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.