CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053358_P001	Maize	cytosol	93.63	94.32
Os02t0260200-01	Rice	cytosol, endoplasmic reticulum	86.27	86.27
GSMUA_Achr10P...	Banana	cytosol	69.36	74.47
GSMUA_Achr6P14190_001	Banana	cytosol	68.63	73.68
GSMUA_Achr3P03450_001	Banana	cytosol	66.67	73.32
GSMUA_Achr7P10710_001	Banana	cytosol	64.22	69.87
KRH68853	Soybean	cytosol	59.07	59.8
KRG97101	Soybean	cytosol	57.84	58.27
EES01202	Sorghum	cytosol	57.84	58.13
VIT_15s0046g01540.t01	Wine grape	cytosol	58.82	58.11
Solyc01g095370.2.1	Tomato	cytosol	57.11	57.67
PGSC0003DMT400000251	Potato	cytosol	57.11	57.53
Bra007616.1-P	Field mustard	cytosol	56.62	57.18
Bra003458.1-P	Field mustard	nucleus	56.13	56.13
CDY52009	Canola	nucleus	55.88	56.02
CDY53910	Canola	cytosol	55.64	55.64
CDX89124	Canola	cytosol	55.64	55.5
CDY43939	Canola	cytosol	55.39	54.2
VIT_02s0025g00830.t01	Wine grape	cytosol	53.92	54.19
Bra014429.1-P	Field mustard	cytosol	55.64	53.92
KRH47995	Soybean	cytosol	35.54	53.9
CDX71729	Canola	mitochondrion	56.37	51.8
CDY11364	Canola	cytosol, golgi, nucleus	56.62	50.77
AT3G61590.4	Thale cress	plasma membrane	54.9	50.11
EES11618	Sorghum	plastid	22.55	21.8
EES04122	Sorghum	cytosol	21.32	19.68
OQU90263	Sorghum	cytosol, mitochondrion, plastid	18.14	17.96
KXG39191	Sorghum	nucleus	18.38	17.86
OQU76836	Sorghum	plastid	17.16	16.24

Protein Annotations

Gene3D:1.20.1280.50	MapMan:19.2.2.8.1.4.6	Gene3D:2.120.10.80	UniProt:A0A194YP15	ncoils:Coil	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR001810
InterPro:IPR015915	EnsemblPlants:KXG29968	ProteinID:KXG29968	ProteinID:KXG29968.1	ProteinID:KXG29969.1	InterPro:Kelch-typ_b-propeller
PFAM:PF12937	PFscan:PS50181	PANTHER:PTHR10706	PANTHER:PTHR10706:SF140	SMART:SM00256	EnsemblPlantsGene:SORBI_3004G116400
SUPFAM:SSF50965	SUPFAM:SSF81383	UniParc:UPI0001C80CBC	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:+:12184608..12187676

Molecular Weight (calculated)

46043.9 Da

IEP (calculated)

6.084

GRAVY (calculated)

-0.104

Length

408 amino acids

Sequence
(BLAST)

001: MLAMGSEEWE LYPSSYIGSQ VIEYRPVSED SDDDQNGDVA VSLDAVLPDD LLEKVLSFLP VASIIRSGSV CKRWHEIVHA QRHAWSKMVP QKPWYFMFTC
101: SEDAVSGFAY DPSLRKWYGF DFPCIEKSNW STSSSAGLVC LMDSENRRRI LVCNPITKDW KRLLDAPGGK TADYSALAFS VDRSSHHYTV AVARSNQVPS
201: EYYQWEFTIH LYESVSGSWV TPFTGVLLGW RGGDECVICD GILYYLVYST GVLVNNNEHR HCLVMYDLTA RPNHTSLMSM AIPVPCALTC GRLMNLSGKL
301: VLVGGIGKQD RPGIIKGIGI WELHNKEWCE VARMPHKFFQ GFGEFDDVFA SCGADDLIYI QSYGSPALLT FEINHKSWKW SVKSPVSKRF PLQLFTGFSF
401: EPRLDIAL

Best Arabidopsis Sequence Match ( AT3G61590.4 )
(BLAST)

001: MLDKVLILSL FFVFCIFDLP LCMYAKANLI DKRLLRMEAE TSWTNYPYSY ITYVPEAESY REQSDDEAKV ETFSMDSLLP DDLLERILSF LPIASIFRAG
101: TVCKRWNEIV SSRRFLCNFS NNSVSQRPWY FMFTTTDDPS GYAYDPIIRK WYSFDLPCIE TSNWFVASSC GLVCFMDNDC RNKIYVSNPI TKQWRTLIEP
201: PGHKSTDYTA MSTSVNRANQ AVNRANRSYS VSIVKSKQVP GNFFQWDLSI HLYSSETMTW TTLVNDVLSG WRGGNESVIC NNVLYFMIYS TGGSDHRHGL
301: IASNLSSIGS PSSGILMRSF IPMPCSLTCG RLMNLRERLV IVGGIGKHDR PEVIKGIGIW VLKGKEWVEM AKMPQRFFQG FGEFDEVFAS SGTDDLVYIQ
401: SYGSPALLTF DMNLKYWRWS QKCPVTKKFP LQLFTGFCFE PRLEIAP

Arabidopsis Description

HWSGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRL4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.