CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97101	Soybean	cytosol	94.54	94.07
VIT_15s0046g01540.t01	Wine grape	cytosol	76.67	74.82
Solyc01g095370.2.1	Tomato	cytosol	74.19	74.01
PGSC0003DMT400000251	Potato	cytosol	73.7	73.33
KRH47995	Soybean	cytosol	46.4	69.52
Bra007616.1-P	Field mustard	cytosol	64.02	63.86
CDX89124	Canola	cytosol	64.76	63.81
CDY52009	Canola	nucleus	64.27	63.64
Bra003458.1-P	Field mustard	nucleus	63.77	62.99
CDY53910	Canola	cytosol	63.77	62.99
GSMUA_Achr9P05330_001	Banana	cytosol	62.03	62.19
Bra014429.1-P	Field mustard	cytosol	64.76	62.0
CDY43939	Canola	cytosol	64.02	61.87
GSMUA_Achr6P14190_001	Banana	cytosol	58.06	61.58
GSMUA_Achr7P10710_001	Banana	cytosol	57.07	61.33
GSMUA_Achr10P...	Banana	cytosol	56.08	59.47
Zm00001d043989_P001	Maize	cytosol	59.06	59.2
EES01202	Sorghum	cytosol	59.55	59.11
KXG29968	Sorghum	cytosol	59.8	59.07
GSMUA_Achr3P03450_001	Banana	cytosol	54.34	59.03
TraesCS3B01G267600.1	Wheat	cytosol	58.06	58.21
Zm00001d053358_P001	Maize	cytosol	58.31	58.02
TraesCS3A01G239100.1	Wheat	cytosol	57.82	57.96
HORVU3Hr1G059460.1	Barley	cytosol	57.82	57.96
TraesCS3D01G239300.1	Wheat	cytosol	57.82	57.96
AT3G61590.4	Thale cress	plasma membrane	64.27	57.94
Os01t0659900-01	Rice	cytosol	59.06	57.91
CDX71729	Canola	mitochondrion	63.77	57.88
Os02t0260200-01	Rice	cytosol, endoplasmic reticulum	58.06	57.35
CDY11364	Canola	cytosol, golgi, nucleus	63.52	56.26
Zm00001d016066_P001	Maize	cytosol	57.32	55.66
GSMUA_Achr8P27920_001	Banana	golgi, mitochondrion, plasma membrane, plastid	57.07	42.75
KRH45144	Soybean	cytosol, plastid	24.32	22.37
KRH01425	Soybean	cytosol	24.57	21.9
KRH42677	Soybean	cytosol, nucleus, plasma membrane	24.32	21.63
KRH58777	Soybean	cytosol	24.32	21.59
KRH31515	Soybean	cytosol	23.33	20.89
KRH58532	Soybean	plastid	22.08	20.7
KRH52086	Soybean	plastid	17.87	20.69
KRH42420	Soybean	plastid	22.33	20.45
KRH15707	Soybean	cytosol	20.6	20.39
KRH15449	Soybean	cytosol, mitochondrion, nucleus	19.35	20.1
KRH61403	Soybean	plastid	17.87	20.06
KRG97395	Soybean	cytosol	22.83	19.91
KRH05328	Soybean	cytosol	20.1	19.9
KRH52288	Soybean	cytosol	19.6	19.13
KRH61620	Soybean	cytosol	19.35	18.89

Protein Annotations

Gene3D:1.20.1280.50	EntrezGene:100817678	MapMan:19.2.2.8.1.4.6	EMBL:ACUP02002125	InterPro:F-box-like_dom_sf	InterPro:F-box_dom
EnsemblPlantsGene:GLYMA_03G254500	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:Gal_Oxase/kelch_b-propeller	UniProt:I1JRW3
InterPro:IPR001810	EnsemblPlants:KRH68853	ProteinID:KRH68853	ProteinID:KRH68853.1	PFAM:PF00646	PFscan:PS50181
PANTHER:PTHR10706	PANTHER:PTHR10706:SF138	SMART:SM00256	SUPFAM:SSF50965	SUPFAM:SSF81383	UniParc:UPI000233A642

Description

hypothetical protein

Coordinates

chr3:+:44972601..44976127

Molecular Weight (calculated)

45910.8 Da

IEP (calculated)

5.822

GRAVY (calculated)

-0.202

Length

403 amino acids

Sequence
(BLAST)

001: MAGETSWISH YDDRQRETGA FDSFLELSEE GEKEATAVSL DVLPDDLLER ILAYLPIASI FRAGCVSKRW HEIVNSERFV WNLSHVLPQK PWYFMFTSSD
101: EPGGHAFDPL LRKWYSIELP CIGTSNWFIA SSYGMVCFMD NDSRSELCIC NPITKTYRKL EEPPGLKFSD YSALAISVNR ESHRYTVAIV KSKQVPDNYV
201: QWDISIHLYN SENAIWVTSL TEVLMGWRGG NESVICNEML YFLVYSTGGG QSENRHALVA YNMSNHSSQG SLTRNFIPVP CSLTCGRLMN LKEKLVMVGG
301: IGKPDRPDII KGIGIWLLND KKWEEIARMP HKFFQGFGEL DDVFASSGAD DLIYIQSYGA PALLIFDVNH KQWKWSQKCP VSKRFPLQLF TGFCFEPRLE
401: IAP

Best Arabidopsis Sequence Match ( AT3G61590.4 )
(BLAST)

001: MLDKVLILSL FFVFCIFDLP LCMYAKANLI DKRLLRMEAE TSWTNYPYSY ITYVPEAESY REQSDDEAKV ETFSMDSLLP DDLLERILSF LPIASIFRAG
101: TVCKRWNEIV SSRRFLCNFS NNSVSQRPWY FMFTTTDDPS GYAYDPIIRK WYSFDLPCIE TSNWFVASSC GLVCFMDNDC RNKIYVSNPI TKQWRTLIEP
201: PGHKSTDYTA MSTSVNRANQ AVNRANRSYS VSIVKSKQVP GNFFQWDLSI HLYSSETMTW TTLVNDVLSG WRGGNESVIC NNVLYFMIYS TGGSDHRHGL
301: IASNLSSIGS PSSGILMRSF IPMPCSLTCG RLMNLRERLV IVGGIGKHDR PEVIKGIGIW VLKGKEWVEM AKMPQRFFQG FGEFDEVFAS SGTDDLVYIQ
401: SYGSPALLTF DMNLKYWRWS QKCPVTKKFP LQLFTGFCFE PRLEIAP

Arabidopsis Description

HWSGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRL4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.