Factsheet for Bra014429.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89124	Canola	cytosol	97.15	100.0
Bra007616.1-P	Field mustard	cytosol	87.65	91.34
Bra003458.1-P	Field mustard	nucleus	84.56	87.25
AT3G61590.4	Thale cress	plasma membrane	84.32	79.42
Solyc01g095370.2.1	Tomato	cytosol	64.85	67.57
PGSC0003DMT400000251	Potato	cytosol	64.85	67.41
KRH68853	Soybean	cytosol	62.0	64.76
KRG97101	Soybean	cytosol	61.76	64.2
VIT_02s0025g00830.t01	Wine grape	cytosol	60.33	62.56
GSMUA_Achr9P05330_001	Banana	cytosol	59.14	61.94
KRH47995	Soybean	cytosol	38.72	60.59
GSMUA_Achr6P14190_001	Banana	cytosol	52.73	58.42
GSMUA_Achr3P03450_001	Banana	cytosol	51.31	58.22
GSMUA_Achr7P10710_001	Banana	cytosol	51.78	58.13
GSMUA_Achr10P...	Banana	cytosol	51.54	57.11
Zm00001d043989_P001	Maize	cytosol	53.68	56.22
EES01202	Sorghum	cytosol	53.68	55.66
KXG29968	Sorghum	cytosol	53.92	55.64
TraesCS3B01G267600.1	Wheat	cytosol	52.73	55.22
TraesCS3D01G239300.1	Wheat	cytosol	52.73	55.22
HORVU3Hr1G059460.1	Barley	cytosol	52.49	54.98
TraesCS3A01G239100.1	Wheat	cytosol	52.26	54.73
Zm00001d053358_P001	Maize	cytosol	52.49	54.57
Os02t0260200-01	Rice	cytosol, endoplasmic reticulum	52.49	54.17
Zm00001d016066_P001	Maize	cytosol	52.97	53.73
Os01t0659900-01	Rice	cytosol	52.26	53.53
GSMUA_Achr8P27920_001	Banana	golgi, mitochondrion, plasma membrane, plastid	53.21	41.64
Bra027473.1-P	Field mustard	plastid	20.9	24.65
Bra006317.1-P	Field mustard	cytosol, plastid	23.52	22.76
Bra011423.1-P	Field mustard	nucleus	20.9	21.57
Bra030038.1-P	Field mustard	nucleus, plastid	23.04	21.0
Bra039878.1-P	Field mustard	plastid	22.09	20.9
Bra032820.1-P	Field mustard	nucleus	23.04	20.86
Bra037018.1-P	Field mustard	cytosol	18.29	19.59

Protein Annotations

Gene3D:1.20.1280.50	MapMan:19.2.2.8.1.4.6	Gene3D:2.120.10.80	EnsemblPlantsGene:Bra014429	EnsemblPlants:Bra014429.1	EnsemblPlants:Bra014429.1-P
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:Gal_Oxase/kelch_b-propeller
InterPro:IPR001810	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	UniProt:M4DD61	PFAM:PF12937	PFscan:PS50181
PANTHER:PTHR10706	PANTHER:PTHR10706:SF138	SMART:SM00256	SUPFAM:SSF50965	SUPFAM:SSF81383	UniParc:UPI000254383F
SEG:seg	:	:	:	:	:

Description

AT3G61590 (E=1e-186) HWS, HS | HWS (HAWAIIAN SKIRT); ubiquitin-protein ligase

Coordinates

chrA04:-:588953..596660

Molecular Weight (calculated)

48052.3 Da

IEP (calculated)

6.360

GRAVY (calculated)

-0.253

Length

421 amino acids

Sequence
(BLAST)

001: MLALPKKEVA LRMEAETSWT TYPYNYMTTY IPEAESYSEQ SDDDEETKLQ TFAMDSLLPN DLLERILSFL PIASIFRAGT VCKRWNEIVS SQRFLWNFSN
101: NNNNNSVSQG PWYFMFTTTD DPSGYAYDPV IKKWYSFDLP CIETSNWFIA SSCGLVCFMD NDCRSKIYVS NPITKQWRRL IEPPGHKATD YTALSTSMNR
201: AKQSYSVSIV KSKQVAGDFF QWDLSIHLYS SETMTWTTSV TDVLTGWRGG DESVICNNVL YFLIYTTGGN SDHRHGLIAS NLSSSTSSLM RSFIPMPCAL
301: TCGRLMNLKE RLVVVGGIGK HDRPEIIKGI GIWCLKGGRE WQEMARMPQR FFQGFGELDD VFASSGSDDL VYIQSYGSPA LLMFDMKLKC WKWSQKCPVS
401: KKFPLQLFTG FCFEPRLEIT P

Best Arabidopsis Sequence Match ( AT3G61590.4 )
(BLAST)

001: MLDKVLILSL FFVFCIFDLP LCMYAKANLI DKRLLRMEAE TSWTNYPYSY ITYVPEAESY REQSDDEAKV ETFSMDSLLP DDLLERILSF LPIASIFRAG
101: TVCKRWNEIV SSRRFLCNFS NNSVSQRPWY FMFTTTDDPS GYAYDPIIRK WYSFDLPCIE TSNWFVASSC GLVCFMDNDC RNKIYVSNPI TKQWRTLIEP
201: PGHKSTDYTA MSTSVNRANQ AVNRANRSYS VSIVKSKQVP GNFFQWDLSI HLYSSETMTW TTLVNDVLSG WRGGNESVIC NNVLYFMIYS TGGSDHRHGL
301: IASNLSSIGS PSSGILMRSF IPMPCSLTCG RLMNLRERLV IVGGIGKHDR PEVIKGIGIW VLKGKEWVEM AKMPQRFFQG FGEFDEVFAS SGTDDLVYIQ
401: SYGSPALLTF DMNLKYWRWS QKCPVTKKFP LQLFTGFCFE PRLEIAP

Arabidopsis Description

HWSGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRL4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.