Factsheet for VIT_02s0025g00830.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0046g01540.t01	Wine grape	cytosol	68.23	67.07
Bra007616.1-P	Field mustard	cytosol	62.32	62.62
CDX89124	Canola	cytosol	62.56	62.1
CDY52009	Canola	nucleus	61.82	61.67
Bra003458.1-P	Field mustard	nucleus	61.08	60.78
CDY53910	Canola	cytosol	61.08	60.78
Bra014429.1-P	Field mustard	cytosol	62.56	60.33
CDY43939	Canola	cytosol	61.82	60.19
GSMUA_Achr9P05330_001	Banana	cytosol	58.37	58.96
GSMUA_Achr6P14190_001	Banana	cytosol	55.17	58.95
GSMUA_Achr3P03450_001	Banana	cytosol	53.69	58.76
GSMUA_Achr7P10710_001	Banana	cytosol	53.69	58.13
GSMUA_Achr10P...	Banana	cytosol	53.69	57.37
AT3G61590.4	Thale cress	plasma membrane	63.05	57.27
CDX71729	Canola	mitochondrion	61.58	56.31
Zm00001d043989_P001	Maize	cytosol	55.66	56.22
TraesCS3A01G239100.1	Wheat	cytosol	54.93	55.47
EES01202	Sorghum	cytosol	55.17	55.17
CDY11364	Canola	cytosol, golgi, nucleus	61.82	55.16
HORVU3Hr1G059460.1	Barley	cytosol	54.43	54.98
TraesCS3B01G267600.1	Wheat	cytosol	54.43	54.98
TraesCS3D01G239300.1	Wheat	cytosol	54.43	54.98
Os01t0659900-01	Rice	cytosol	55.17	54.5
Os02t0260200-01	Rice	cytosol, endoplasmic reticulum	54.68	54.41
KXG29968	Sorghum	cytosol	54.19	53.92
Zm00001d053358_P001	Maize	cytosol	53.2	53.33
Zm00001d016066_P001	Maize	cytosol	52.96	51.81
GSMUA_Achr8P27920_001	Banana	golgi, mitochondrion, plasma membrane, plastid	54.19	40.89
VIT_14s0083g00810.t01	Wine grape	cytosol	22.66	21.05
VIT_01s0011g01220.t01	Wine grape	plastid	21.67	20.18
VIT_04s0008g03190.t01	Wine grape	cytosol	19.95	19.9
VIT_01s0010g03730.t01	Wine grape	cytosol	21.43	19.12
VIT_18s0001g09110.t01	Wine grape	plasma membrane	20.69	16.12

Protein Annotations

Gene3D:1.20.1280.50	EntrezGene:100251855	wikigene:100251855	EntrezGene:109121643	MapMan:19.2.2.8.1.4.6	ProteinID:CBI34427
ProteinID:CBI34427.3	UniProt:D7TVA2	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	EMBL:FN596251	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0007275	GO:GO:0008150	GO:GO:0099402	InterPro:Gal_Oxase/kelch_b-propeller
InterPro:IPR001810	EntrezGene:LOC100251855	wikigene:LOC100251855	PFAM:PF00646	PFscan:PS50181	PANTHER:PTHR10706
PANTHER:PTHR10706:SF138	SMART:SM00256	SUPFAM:SSF50965	SUPFAM:SSF81383	UniParc:UPI00015CCEEB	ArrayExpress:VIT_02s0025g00830
EnsemblPlantsGene:VIT_02s0025g00830	EnsemblPlants:VIT_02s0025g00830.t01	RefSeq:XP_003631384	RefSeq:XP_003631384.1	RefSeq:XP_019071952.1	RefSeq:XP_019071953.1

Description

No Description!

Coordinates

chr2:+:835067..837755

Molecular Weight (calculated)

46070.1 Da

IEP (calculated)

5.638

GRAVY (calculated)

-0.083

Length

406 amino acids

Sequence
(BLAST)

001: MEGETSWIDY QFDDNRTQVL DLRVFDLYPE LSDDDKSDNN LVSIDSILPD DLLERILALL PIASIFKAAA VSRKWCEIVH SRRFLCNASR VLVPKPWYFM
101: FTGSDEPTGY AYDPMDRKWY SFQLPLIETS SWFIASSYGL VCFMDNDSRS ELYVCNLITK DHRKLVEPPG QKFSDYSALA ISVDSLSHSY TVAVVKSKQI
201: PNNFVQWNLS IHCYSSETGM WVSPVMELMT GWRGGDDSVI CDGVLYFLVH STTLTGNQHA LATFNLSSRP SNGLSIDSFI PVPCSLTCGR LMNMNGKLVM
301: VGGIGKHDRP GIIKGIGIWA LKGRDWEEVS RMPHRFFQGF GEFDDVFASS GFNSLVYIQS YGAPALLVFD MNLRQWKWSQ KCPVTKRFPL QLFTGFCFEP
401: RLEIAP

Best Arabidopsis Sequence Match ( AT3G61590.1 )
(BLAST)

001: MEAETSWTNY PYSYITYVPE AESYREQSDD EAKVETFSMD SLLPDDLLER ILSFLPIASI FRAGTVCKRW NEIVSSRRFL CNFSNNSVSQ RPWYFMFTTT
101: DDPSGYAYDP IIRKWYSFDL PCIETSNWFV ASSCGLVCFM DNDCRNKIYV SNPITKQWRT LIEPPGHKST DYTAMSTSVN RANQAVNRAN RSYSVSIVKS
201: KQVPGNFFQW DLSIHLYSSE TMTWTTLVND VLSGWRGGNE SVICNNVLYF MIYSTGGSDH RHGLIASNLS SIGSPSSGIL MRSFIPMPCS LTCGRLMNLR
301: ERLVIVGGIG KHDRPEVIKG IGIWVLKGKE WVEMAKMPQR FFQGFGEFDE VFASSGTDDL VYIQSYGSPA LLTFDMNLKY WRWSQKCPVT KKFPLQLFTG
401: FCFEPRLEIA P

Arabidopsis Description

HWSGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRL4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.