CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003458.1-P	Field mustard	nucleus	98.04	98.04
CDY52009	Canola	nucleus	92.16	92.38
CDX89124	Canola	cytosol	86.52	86.31
CDY43939	Canola	cytosol	85.29	83.45
CDX71729	Canola	mitochondrion	87.75	80.63
CDY11364	Canola	cytosol, golgi, nucleus	87.5	78.46
AT3G61590.4	Thale cress	plasma membrane	81.86	74.72
Solyc01g095370.2.1	Tomato	cytosol	63.97	64.6
PGSC0003DMT400000251	Potato	cytosol	63.73	64.2
KRH68853	Soybean	cytosol	62.99	63.77
KRG97101	Soybean	cytosol	62.75	63.21
GSMUA_Achr9P05330_001	Banana	cytosol	61.03	61.94
VIT_02s0025g00830.t01	Wine grape	cytosol	60.78	61.08
KRH47995	Soybean	cytosol	39.95	60.59
GSMUA_Achr6P14190_001	Banana	cytosol	54.41	58.42
GSMUA_Achr3P03450_001	Banana	cytosol	52.7	57.95
GSMUA_Achr7P10710_001	Banana	cytosol	52.94	57.6
GSMUA_Achr10P...	Banana	cytosol	52.94	56.84
EES01202	Sorghum	cytosol	56.37	56.65
Zm00001d043989_P001	Maize	cytosol	55.64	56.47
TraesCS3D01G239300.1	Wheat	cytosol	55.15	55.97
TraesCS3A01G239100.1	Wheat	cytosol	55.15	55.97
HORVU3Hr1G059460.1	Barley	cytosol	54.9	55.72
KXG29968	Sorghum	cytosol	55.64	55.64
TraesCS3B01G267600.1	Wheat	cytosol	54.66	55.47
Os02t0260200-01	Rice	cytosol, endoplasmic reticulum	54.41	54.41
Zm00001d053358_P001	Maize	cytosol	53.92	54.32
Os01t0659900-01	Rice	cytosol	54.66	54.26
Zm00001d016066_P001	Maize	cytosol	54.9	53.98
GSMUA_Achr8P27920_001	Banana	golgi, mitochondrion, plasma membrane, plastid	54.41	41.26
CDY32964	Canola	plastid	22.06	22.61
CDX70633	Canola	cytosol, plastid	24.02	22.58
CDX78648	Canola	cytosol, plastid	24.02	22.53
CDY43599	Canola	plastid	22.06	22.33
CDY52183	Canola	plastid	23.28	21.3
CDY12448	Canola	plastid	23.28	21.3
CDY03911	Canola	nucleus, plastid	23.77	21.09
CDY15715	Canola	nucleus, plastid	23.77	20.91
CDX84930	Canola	cytosol, plastid	23.77	20.77
CDY27608	Canola	nucleus	23.28	20.43
CDX75335	Canola	nucleus	20.34	20.34
CDX68951	Canola	cytosol	19.85	19.71
CDX72391	Canola	cytosol	18.14	18.73
CDY71979	Canola	cytosol	17.89	18.53

Protein Annotations

Gene3D:1.20.1280.50	MapMan:19.2.2.8.1.4.6	Gene3D:2.120.10.80	UniProt:A0A078IS73	EnsemblPlants:CDY53910	ProteinID:CDY53910
ProteinID:CDY53910.1	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:GSBRNA2T00011678001	InterPro:IPR001810	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	PFAM:PF00646	PFscan:PS50181
PANTHER:PTHR10706	PANTHER:PTHR10706:SF138	SMART:SM00256	SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI0004EEDB6A
SEG:seg	:	:	:	:	:

Description

BnaA07g38180DBnaA07g38180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IS73]

Coordinates

chrLK033249:-:35784..37819

Molecular Weight (calculated)

46106.6 Da

IEP (calculated)

6.392

GRAVY (calculated)

-0.247

Length

408 amino acids

Sequence
(BLAST)

001: MEAETSWTTY PYSYITTHVP EAETYSDHND DDETKVQTFS MDSLLPNDLL ERILTFLPIA SIFRAGTVCK RWNEIVSSQR FLTNFSNNNS APQSPWYFMF
101: TSTDDPSGYA YDPVIKKWYG FDLPCIESSN WFVASSCGLV CFMDNDCRNK IYVSNPITKQ WRRLTEPPGH RSTDYAALSA SVNRAKQSYS VSVVKSKQVQ
201: GDFSQWEISV HLYSSETMTW TTRLTDVLAG WRGGDESVIC GNVLYFLIYS TGGSDHRHGL IALNLSTISS SNGVLMRSFI PMPCSLTCGR LMNLKEKLVV
301: VGGIGKHDRP DIIKGIGVWC LNGGGREWQE VARMPQRFFQ GFGELDDVFA SSGSDDMVYV QSYGSPALLT FDMKLKCWKW SQKCPVSKKF PLQLFTGFCF
401: EPRLEIAP

Best Arabidopsis Sequence Match ( AT3G61590.4 )
(BLAST)

001: MLDKVLILSL FFVFCIFDLP LCMYAKANLI DKRLLRMEAE TSWTNYPYSY ITYVPEAESY REQSDDEAKV ETFSMDSLLP DDLLERILSF LPIASIFRAG
101: TVCKRWNEIV SSRRFLCNFS NNSVSQRPWY FMFTTTDDPS GYAYDPIIRK WYSFDLPCIE TSNWFVASSC GLVCFMDNDC RNKIYVSNPI TKQWRTLIEP
201: PGHKSTDYTA MSTSVNRANQ AVNRANRSYS VSIVKSKQVP GNFFQWDLSI HLYSSETMTW TTLVNDVLSG WRGGNESVIC NNVLYFMIYS TGGSDHRHGL
301: IASNLSSIGS PSSGILMRSF IPMPCSLTCG RLMNLRERLV IVGGIGKHDR PEVIKGIGIW VLKGKEWVEM AKMPQRFFQG FGEFDEVFAS SGTDDLVYIQ
401: SYGSPALLTF DMNLKYWRWS QKCPVTKKFP LQLFTGFCFE PRLEIAP

Arabidopsis Description

HWSGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRL4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.