Factsheet for Solyc01g095370.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400000251	Potato	cytosol	98.02	97.78
VIT_15s0046g01540.t01	Wine grape	cytosol	77.97	76.27
KRH68853	Soybean	cytosol	74.01	74.19
KRG97101	Soybean	cytosol	73.51	73.33
Bra007616.1-P	Field mustard	cytosol	67.57	67.57
CDX89124	Canola	cytosol	67.57	66.75
KRH47995	Soybean	cytosol	43.56	65.43
Bra014429.1-P	Field mustard	cytosol	67.57	64.85
CDY43939	Canola	cytosol	66.34	64.27
GSMUA_Achr9P05330_001	Banana	cytosol	63.86	64.18
Bra003458.1-P	Field mustard	nucleus	64.6	63.97
CDY53910	Canola	cytosol	64.6	63.97
CDY52009	Canola	nucleus	64.36	63.88
GSMUA_Achr7P10710_001	Banana	cytosol	56.93	61.33
GSMUA_Achr10P...	Banana	cytosol	57.67	61.32
CDX71729	Canola	mitochondrion	67.08	61.04
GSMUA_Achr6P14190_001	Banana	cytosol	57.18	60.79
GSMUA_Achr3P03450_001	Banana	cytosol	55.69	60.65
Zm00001d043989_P001	Maize	cytosol	60.15	60.45
AT3G61590.4	Thale cress	plasma membrane	66.58	60.18
CDY11364	Canola	cytosol, golgi, nucleus	67.08	59.56
EES01202	Sorghum	cytosol	58.66	58.37
Zm00001d053358_P001	Maize	cytosol	58.42	58.27
TraesCS3B01G267600.1	Wheat	cytosol	57.92	58.21
Os01t0659900-01	Rice	cytosol	59.16	58.15
TraesCS3D01G239300.1	Wheat	cytosol	57.67	57.96
TraesCS3A01G239100.1	Wheat	cytosol	57.43	57.71
HORVU3Hr1G059460.1	Barley	cytosol	57.43	57.71
Os02t0260200-01	Rice	cytosol, endoplasmic reticulum	57.92	57.35
KXG29968	Sorghum	cytosol	57.67	57.11
Zm00001d016066_P001	Maize	cytosol	57.18	55.66
GSMUA_Achr8P27920_001	Banana	golgi, mitochondrion, plasma membrane, plastid	58.17	43.68
Solyc02g089310.1.1	Tomato	cytosol, plastid	25.99	23.97
Solyc05g015520.2.1	Tomato	cytosol	24.26	21.03
Solyc02g081670.1.1	Tomato	plastid	23.27	20.66
Solyc08g067300.1.1	Tomato	nucleus	20.05	19.57

Protein Annotations

EnsemblPlants:Solyc01g095370.2.1	EnsemblPlantsGene:Solyc01g095370.2	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR001810	PANTHER:PTHR10706	PANTHER:PTHR10706:SF138
PFAM:PF12937	PFscan:PS50181	SEG:seg	SMART:SM00256	SUPFAM:SSF50965	SUPFAM:SSF81383
UniParc:UPI0002768F4C	UniProt:K4AZS6	MapMan:19.2.2.8.1.4.6	:	:	:

Description

No Description!

Coordinates

chr1:+:86650589..86652009

Molecular Weight (calculated)

45873.0 Da

IEP (calculated)

5.003

GRAVY (calculated)

-0.074

Length

404 amino acids

Sequence
(BLAST)

001: MEETSWVSHC PDYVVPDMVE FDSFSELNDE ENREASSVPV DLILPDDLLE RILAYLPIAS IFRASCVCKR WCEIVNSRRF LWNFSQVLSQ KPWYFMFTSS
101: EEPVGYAYDP SLRKWYSIDL PCIQTSNWFI ASSCGLVCIM DNDSRSELYV CNPITKCSKN LQEPPGLKFS DYSALAICAN MKTSCYSVAI VKSKQVPGNF
201: YQWDLSIHIY DSGTMKWLTP LTEVLTGWRG GDESVICDGV LYFLIYATGG GGLESRHGLI TYNLSSRSSH CSLIKTFIPV PCSLTCGRLM NLKEKLVMVG
301: GIGKPDRPDI IKGIGIWALQ GTEWQEIARM PHKYFQGFGE FDDVFASSGT DDLIYIQSYG APALLVFDVN QKQWRWSQKC PVTKRFPLQL FTGFCFEPRL
401: EMSP

Best Arabidopsis Sequence Match ( AT3G61590.3 )
(BLAST)

001: MIDDRLLRME AETSWTNYPY SYITYVPEAE SYREQSDDEA KVETFSMDSL LPDDLLERIL SFLPIASIFR AGTVCKRWNE IVSSRRFLCN FSNNSVSQRP
101: WYFMFTTTDD PSGYAYDPII RKWYSFDLPC IETSNWFVAS SCGLVCFMDN DCRNKIYVSN PITKQWRTLI EPPGHKSTDY TAMSTSVNRA NQAVNRANRS
201: YSVSIVKSKQ VPGNFFQWDL SIHLYSSETM TWTTLVNDVL SGWRGGNESV ICNNVLYFMI YSTGGSDHRH GLIASNLSSI GSPSSGILMR SFIPMPCSLT
301: CGRLMNLRER LVIVGGIGKH DRPEVIKGIG IWVLKGKEWV EMAKMPQRFF QGFGEFDEVF ASSGTDDLVY IQSYGSPALL TFDMNLKYWR WSQKCPVTKK
401: FPLQLFTGFC FEPRLEIAP

Arabidopsis Description

HWSGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRL4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.