Factsheet for PGSC0003DMT400000251

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g095370.2.1	Tomato	cytosol	97.78	98.02
VIT_15s0046g01540.t01	Wine grape	cytosol	77.78	76.27
KRH68853	Soybean	cytosol	73.33	73.7
KRG97101	Soybean	cytosol	73.09	73.09
Bra007616.1-P	Field mustard	cytosol	67.41	67.57
CDX89124	Canola	cytosol	67.41	66.75
KRH47995	Soybean	cytosol	43.46	65.43
Bra014429.1-P	Field mustard	cytosol	67.41	64.85
CDY43939	Canola	cytosol	66.17	64.27
GSMUA_Achr9P05330_001	Banana	cytosol	63.7	64.18
CDY52009	Canola	nucleus	64.44	64.13
Bra003458.1-P	Field mustard	nucleus	64.2	63.73
CDY53910	Canola	cytosol	64.2	63.73
GSMUA_Achr7P10710_001	Banana	cytosol	56.79	61.33
GSMUA_Achr10P...	Banana	cytosol	57.28	61.05
CDX71729	Canola	mitochondrion	66.91	61.04
GSMUA_Achr6P14190_001	Banana	cytosol	57.04	60.79
GSMUA_Achr3P03450_001	Banana	cytosol	55.56	60.65
AT3G61590.4	Thale cress	plasma membrane	66.67	60.4
Zm00001d043989_P001	Maize	cytosol	59.75	60.2
CDY11364	Canola	cytosol, golgi, nucleus	66.91	59.56
TraesCS3B01G267600.1	Wheat	cytosol	58.02	58.46
Zm00001d053358_P001	Maize	cytosol	58.27	58.27
TraesCS3D01G239300.1	Wheat	cytosol	57.78	58.21
Os01t0659900-01	Rice	cytosol	59.01	58.15
EES01202	Sorghum	cytosol	58.27	58.13
TraesCS3A01G239100.1	Wheat	cytosol	57.53	57.96
HORVU3Hr1G059460.1	Barley	cytosol	57.53	57.96
Os02t0260200-01	Rice	cytosol, endoplasmic reticulum	57.78	57.35
KXG29968	Sorghum	cytosol	57.53	57.11
Zm00001d016066_P001	Maize	cytosol	57.04	55.66
GSMUA_Achr8P27920_001	Banana	golgi, mitochondrion, plasma membrane, plastid	57.78	43.49
PGSC0003DMT400003737	Potato	cytosol	26.17	24.2
PGSC0003DMT400084722	Potato	cytosol, mitochondrion	23.7	20.6
PGSC0003DMT400045739	Potato	plastid	22.96	20.31
PGSC0003DMT400019032	Potato	nucleus	20.74	20.1
PGSC0003DMT400027543	Potato	cytosol	17.78	18.9

Protein Annotations

Gene3D:1.20.1280.50	EntrezGene:102592726	MapMan:19.2.2.8.1.4.6	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR001810	UniProt:M0ZGD6	PFAM:PF00646
EnsemblPlantsGene:PGSC0003DMG400000081	PGSC:PGSC0003DMG400000081	EnsemblPlants:PGSC0003DMT400000251	PFscan:PS50181	PANTHER:PTHR10706	PANTHER:PTHR10706:SF138
SMART:SM00256	SUPFAM:SSF50965	SUPFAM:SSF81383	UniParc:UPI00029579E2	RefSeq:XP_006339654.1	SEG:seg

Description

Protein UNUSUAL FLORAL ORGANS [Source:PGSC_GENE;Acc:PGSC0003DMG400000081]

Coordinates

chr1:+:72869015..72871090

Molecular Weight (calculated)

45996.2 Da

IEP (calculated)

5.275

GRAVY (calculated)

-0.050

Length

405 amino acids

Sequence
(BLAST)

001: MEGETSWVSH CPDYVVPAMV EFDSFSELND EENREASSVP VDLILPDDLL ERILAYLPIA SIFRASCVCK RWYEIVSSRR FLWNFSQVLS QKPWYFMFTS
101: SEEPVGYAYD PSLRKWYSID LPCIQTSNWF IASSCGLVCI MDNDSRSELY VCNPITKCSK NLQEPPGLKF SDYSALAICA SMKTFCYSVA IVKSKQVPGN
201: FYQWDLSIHI YDSGTMKWLT PLTEVLTGWR GGDESVICDG VLYFLIYATG GGGLESRHGL ITYNLSSRSS HCSLIKTFIP VPCSLTCGRL MNLKEKLVMV
301: GGIGKPDRPD IIKGIGIWVL KGTEWQEISR MPHKYFQGFG EFDDVFASSG TDDLIYIQSY GAPALLVFDV NQKQWRWSQK CPVTKRFPLQ LFTGFCFEPR
401: LEMSP

Best Arabidopsis Sequence Match ( AT3G61590.3 )
(BLAST)

001: MIDDRLLRME AETSWTNYPY SYITYVPEAE SYREQSDDEA KVETFSMDSL LPDDLLERIL SFLPIASIFR AGTVCKRWNE IVSSRRFLCN FSNNSVSQRP
101: WYFMFTTTDD PSGYAYDPII RKWYSFDLPC IETSNWFVAS SCGLVCFMDN DCRNKIYVSN PITKQWRTLI EPPGHKSTDY TAMSTSVNRA NQAVNRANRS
201: YSVSIVKSKQ VPGNFFQWDL SIHLYSSETM TWTTLVNDVL SGWRGGNESV ICNNVLYFMI YSTGGSDHRH GLIASNLSSI GSPSSGILMR SFIPMPCSLT
301: CGRLMNLRER LVIVGGIGKH DRPEVIKGIG IWVLKGKEWV EMAKMPQRFF QGFGEFDEVF ASSGTDDLVY IQSYGSPALL TFDMNLKYWR WSQKCPVTKK
401: FPLQLFTGFC FEPRLEIAP

Arabidopsis Description

HWSGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRL4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.