Factsheet for GSMUA_Achr8P27920_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, golgi, plastid

Predictor Summary:

nucleus 2
mitochondrion 2
plasma membrane 2
plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion, plasma membrane, plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus, plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P05330_001	Banana	cytosol	57.62	77.11
GSMUA_Achr6P14190_001	Banana	cytosol	44.98	63.68
GSMUA_Achr7P10710_001	Banana	cytosol	43.87	62.93
GSMUA_Achr10P...	Banana	cytosol	43.49	61.58
GSMUA_Achr3P03450_001	Banana	cytosol	42.38	61.46
TraesCS3B01G267600.1	Wheat	cytosol	45.54	60.95
TraesCS3D01G239300.1	Wheat	cytosol	45.35	60.7
TraesCS3A01G239100.1	Wheat	cytosol	45.17	60.45
HORVU3Hr1G059460.1	Barley	cytosol	45.17	60.45
Os01t0659900-01	Rice	cytosol	46.1	60.34
EES01202	Sorghum	cytosol	45.35	60.1
Zm00001d043989_P001	Maize	cytosol	44.61	59.7
Solyc01g095370.2.1	Tomato	cytosol	43.68	58.17
PGSC0003DMT400000251	Potato	cytosol	43.49	57.78
KRH68853	Soybean	cytosol	42.75	57.07
KRG97101	Soybean	cytosol	42.19	56.05
VIT_15s0046g01540.t01	Wine grape	cytosol	42.94	55.93
Bra007616.1-P	Field mustard	cytosol	41.08	54.7
CDX89124	Canola	cytosol	41.45	54.52
CDY53910	Canola	cytosol	41.26	54.41
VIT_02s0025g00830.t01	Wine grape	cytosol	40.89	54.19
Bra003458.1-P	Field mustard	nucleus	40.89	53.92
KRH47995	Soybean	cytosol	26.95	53.9
CDY52009	Canola	nucleus	40.71	53.81
CDY43939	Canola	cytosol	41.64	53.72
Bra014429.1-P	Field mustard	cytosol	41.64	53.21
CDX71729	Canola	mitochondrion	42.38	51.35
AT3G61590.4	Thale cress	plasma membrane	42.19	50.78
CDY11364	Canola	cytosol, golgi, nucleus	42.38	50.11
GSMUA_Achr1P09520_001	Banana	cytosol	15.43	23.78
GSMUA_AchrUn_...	Banana	cytosol	15.06	21.04
GSMUA_Achr7P11470_001	Banana	nucleus	11.34	17.33
GSMUA_Achr10P...	Banana	cytosol	12.64	16.55
GSMUA_Achr3P23630_001	Banana	plastid	11.71	16.49

Protein Annotations

EnsemblPlants:GSMUA_Achr8P27920_001	EnsemblPlants:GSMUA_Achr8T27920_001	EnsemblPlantsGene:GSMUA_Achr8G27920_001	InterPro:F-box-assoc_interact_dom	InterPro:Gal_Oxase/kelch_b-propeller	PANTHER:PTHR10706
PANTHER:PTHR10706:SF138	SEG:seg	SUPFAM:SSF50965	TIGRFAMs:TIGR01640	TMHMM:TMhelix	UniParc:UPI0002960EC4
UniProt:M0TU95	MapMan:19.2.2.8.1.4.6	:	:	:	:

Description

F-box/kelch-repeat protein At3g61590 [Source:GMGC_GENE;Acc:GSMUA_Achr8G27920_001]

Coordinates

chr8:+:30887769..30890332

Molecular Weight (calculated)

60211.4 Da

IEP (calculated)

8.060

GRAVY (calculated)

-0.010

Length

538 amino acids

Sequence
(BLAST)

001: MVTSKGRGKA CKKNQLLTVV NPLPVWCSLP VYLVVCFRAA ERTVSFCSFF ISWGLSISIP KQSCLLLGVV FCGRIRSCKI STAEARTAAR FPLPRSLPRW
101: DANKSGSCQQ PLSAIIAPDS ELWLYFGGTN KGKLGVCAER NRKDRILASL SSSAANNLSS LMESDQSWES LSASYSGSKD IERKHVSEGN NRVTVSMVSL
201: DSILPDDVLE KIFSFLPIAS LPQKPWYFMF TFNEAAAGYA YDPVLRKWYN IDLPCIEKSN WFVSSSNGLV CFMDNDTRSR IFVCNPIIRD WKRILEPPGV
301: VFPDYSSLAI SVDRSSHRYT IVVIKSKQVP DDFSQWDFSI HTYNSESESW ESSINTVLSG WRGGDESVIC NGVLYCLIHS TGVVGNADLR HRLMMYDISA
401: TTPHVSSMQV TIPVPCSLTC GRLINLKERL VMVGGIAKYD KPDIIKGIGI WELDAGEWVE VARVPHRFFQ GFGELDDVFA SSGTEDLIFI QSYGATALLV
501: FDMSQKQWKW SAKCPVTKRF PLQLFTGFCF EPRLEMVS

Best Arabidopsis Sequence Match ( AT3G61590.1 )
(BLAST)

001: MEAETSWTNY PYSYITYVPE AESYREQSDD EAKVETFSMD SLLPDDLLER ILSFLPIASI FRAGTVCKRW NEIVSSRRFL CNFSNNSVSQ RPWYFMFTTT
101: DDPSGYAYDP IIRKWYSFDL PCIETSNWFV ASSCGLVCFM DNDCRNKIYV SNPITKQWRT LIEPPGHKST DYTAMSTSVN RANQAVNRAN RSYSVSIVKS
201: KQVPGNFFQW DLSIHLYSSE TMTWTTLVND VLSGWRGGNE SVICNNVLYF MIYSTGGSDH RHGLIASNLS SIGSPSSGIL MRSFIPMPCS LTCGRLMNLR
301: ERLVIVGGIG KHDRPEVIKG IGIWVLKGKE WVEMAKMPQR FFQGFGEFDE VFASSGTDDL VYIQSYGSPA LLTFDMNLKY WRWSQKCPVT KKFPLQLFTG
401: FCFEPRLEIA P

Arabidopsis Description

HWSGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRL4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.