Factsheet for TraesCS3D01G239300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G239100.1	Wheat	cytosol	99.25	99.25
TraesCS3B01G267600.1	Wheat	cytosol	98.76	98.76
HORVU3Hr1G059460.1	Barley	cytosol	98.26	98.26
Os01t0659900-01	Rice	cytosol	82.84	81.02
EES01202	Sorghum	cytosol	79.85	79.06
Zm00001d043989_P001	Maize	cytosol	77.11	77.11
GSMUA_Achr9P05330_001	Banana	cytosol	66.42	66.42
KRH68853	Soybean	cytosol	57.96	57.82
PGSC0003DMT400000251	Potato	cytosol	58.21	57.78
Solyc01g095370.2.1	Tomato	cytosol	57.96	57.67
VIT_15s0046g01540.t01	Wine grape	cytosol	58.96	57.38
KRG97101	Soybean	cytosol	56.72	56.3
Bra003458.1-P	Field mustard	nucleus	56.22	55.39
Bra007616.1-P	Field mustard	cytosol	55.47	55.2
CDY53910	Canola	cytosol	55.97	55.15
CDY52009	Canola	nucleus	55.72	55.04
VIT_02s0025g00830.t01	Wine grape	cytosol	54.98	54.43
CDX89124	Canola	cytosol	55.22	54.28
CDY43939	Canola	cytosol	55.47	53.48
Bra014429.1-P	Field mustard	cytosol	55.22	52.73
KRH47995	Soybean	cytosol	34.83	52.04
CDX71729	Canola	mitochondrion	55.47	50.23
CDY11364	Canola	cytosol, golgi, nucleus	55.22	48.79
AT3G61590.4	Thale cress	plasma membrane	53.98	48.55
GSMUA_Achr8P27920_001	Banana	golgi, mitochondrion, plasma membrane, plastid	60.7	45.35
TraesCS2D01G541700.1	Wheat	mitochondrion	24.63	24.09
TraesCS3D01G428200.2	Wheat	cytosol	21.64	19.46
TraesCS7D01G468700.1	Wheat	plastid	20.15	18.41
TraesCS2D01G175100.1	Wheat	cytosol	16.92	16.31
TraesCS5D01G106500.1	Wheat	cytosol	17.91	16.0

Protein Annotations

EnsemblPlants:TraesCS3D01G239300.1	EnsemblPlantsGene:TraesCS3D01G239300	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR001810	PANTHER:PTHR10706	PANTHER:PTHR10706:SF138
PFAM:PF12937	PFscan:PS50181	SMART:SM00256	SUPFAM:SSF50965	SUPFAM:SSF81383	MapMan:19.2.2.8.1.4.6

Description

No Description!

Coordinates

chr3D:+:331193443..331194651

Molecular Weight (calculated)

45702.7 Da

IEP (calculated)

5.473

GRAVY (calculated)

-0.134

Length

402 amino acids

Sequence
(BLAST)

001: MEDDSSWEAL PIERIRIPAF NFRVISEASN GENELPVSLD AAVPDDILEK IFTFLPIASM IRSTAVCKRW HDIIYSSRYL WTHMLPQRPW YFMFTCNETA
101: SGYAYDPILH KWYDLELQGI DKSSCFVSSS CGLVCFMDND NRNIISVSNP ITKDWKRLLE PPGAKFPDYS TVALKVDQVT HNYTVTLAKS KQVPEDYVQW
201: EFSLYKYDSW SSSWVTAVKE VFIGWRGGDD SVICGGVLYC LIQSTGVLGN VEPRHRLIMY DLVAGPSETS LTQSSIPVPC SLTCGRLLNL REKLVMVGGI
301: AKPNRPDIIK GIGIWELDKT QWQEVSRMPH KFFQGFGELD DVFCSGGADD LVYIQSYGAT ALLGFDMKQR QWKWSAKCPV SKKFPLQLFT GFCFEPRLDI
401: TT

Best Arabidopsis Sequence Match ( AT3G61590.4 )
(BLAST)

001: MLDKVLILSL FFVFCIFDLP LCMYAKANLI DKRLLRMEAE TSWTNYPYSY ITYVPEAESY REQSDDEAKV ETFSMDSLLP DDLLERILSF LPIASIFRAG
101: TVCKRWNEIV SSRRFLCNFS NNSVSQRPWY FMFTTTDDPS GYAYDPIIRK WYSFDLPCIE TSNWFVASSC GLVCFMDNDC RNKIYVSNPI TKQWRTLIEP
201: PGHKSTDYTA MSTSVNRANQ AVNRANRSYS VSIVKSKQVP GNFFQWDLSI HLYSSETMTW TTLVNDVLSG WRGGNESVIC NNVLYFMIYS TGGSDHRHGL
301: IASNLSSIGS PSSGILMRSF IPMPCSLTCG RLMNLRERLV IVGGIGKHDR PEVIKGIGIW VLKGKEWVEM AKMPQRFFQG FGEFDEVFAS SGTDDLVYIQ
401: SYGSPALLTF DMNLKYWRWS QKCPVTKKFP LQLFTGFCFE PRLEIAP

Arabidopsis Description

HWSGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRL4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.