Factsheet for GSMUA_Achr9P05330_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043989_P001	Maize	cytosol	67.66	67.66
GSMUA_Achr7P10710_001	Banana	cytosol	62.69	67.2
Os01t0659900-01	Rice	cytosol	68.41	66.91
GSMUA_Achr6P14190_001	Banana	cytosol	63.18	66.84
EES01202	Sorghum	cytosol	67.16	66.5
TraesCS3D01G239300.1	Wheat	cytosol	66.42	66.42
TraesCS3B01G267600.1	Wheat	cytosol	66.17	66.17
TraesCS3A01G239100.1	Wheat	cytosol	66.17	66.17
HORVU3Hr1G059460.1	Barley	cytosol	65.92	65.92
VIT_15s0046g01540.t01	Wine grape	cytosol	66.17	64.41
GSMUA_Achr10P...	Banana	cytosol	60.7	64.21
GSMUA_Achr3P03450_001	Banana	cytosol	59.2	64.15
Solyc01g095370.2.1	Tomato	cytosol	64.18	63.86
PGSC0003DMT400000251	Potato	cytosol	64.18	63.7
KRH68853	Soybean	cytosol	62.19	62.03
KRG97101	Soybean	cytosol	61.94	61.48
Bra007616.1-P	Field mustard	cytosol	61.44	61.14
CDY53910	Canola	cytosol	61.94	61.03
CDX89124	Canola	cytosol	61.94	60.88
Bra003458.1-P	Field mustard	nucleus	61.44	60.54
CDY52009	Canola	nucleus	60.2	59.46
CDY43939	Canola	cytosol	61.44	59.23
Bra014429.1-P	Field mustard	cytosol	61.94	59.14
VIT_02s0025g00830.t01	Wine grape	cytosol	58.96	58.37
GSMUA_Achr8P27920_001	Banana	golgi, mitochondrion, plasma membrane, plastid	77.11	57.62
KRH47995	Soybean	cytosol	38.31	57.25
CDX71729	Canola	mitochondrion	60.95	55.18
CDY11364	Canola	cytosol, golgi, nucleus	61.19	54.07
AT3G61590.4	Thale cress	plasma membrane	59.7	53.69
GSMUA_Achr1P09520_001	Banana	cytosol	22.64	26.07
GSMUA_AchrUn_...	Banana	cytosol	22.39	23.38
GSMUA_Achr7P11470_001	Banana	nucleus	18.16	20.74
GSMUA_Achr3P23630_001	Banana	plastid	19.65	20.68
GSMUA_Achr10P...	Banana	cytosol	20.65	20.19

Protein Annotations

Gene3D:1.20.1280.50	MapMan:19.2.2.8.1.4.6	Gene3D:2.120.10.80	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr9G05330_001	EnsemblPlants:GSMUA_Achr9P05330_001	EnsemblPlants:GSMUA_Achr9T05330_001	InterPro:Gal_Oxase/kelch_b-propeller
InterPro:IPR001810	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	UniProt:M0TXP2	PFAM:PF12937	PFscan:PS50181
PANTHER:PTHR10706	PANTHER:PTHR10706:SF138	SMART:SM00256	SUPFAM:SSF50965	SUPFAM:SSF81383	UniParc:UPI0002950B92

Description

F-box/kelch-repeat protein At3g61590 [Source:GMGC_GENE;Acc:GSMUA_Achr9G05330_001]

Coordinates

chr9:-:3440655..3441863

Molecular Weight (calculated)

45989.6 Da

IEP (calculated)

7.795

GRAVY (calculated)

-0.069

Length

402 amino acids

Sequence
(BLAST)

001: MESEASWESL YAIHLGRKVL ENRPVSEGNE GVEEFTVSLD SILPYDILER IFSFLPMAST IRATSVCKRW YHIIHSKRFI RANKLPQMPW YFMFTCNEAA
101: AGYAYDPVLR KWYNIDLPCI EKSNWFVSSS HGLVCFMDND SRSRIFVCNP ITKDCKRLLE PPGAKFPDYS SLAMSVDRNS HHYTIVVVKS KQVPGDFSVW
201: DFSIHIYRSE SKSWVSSIKE VLSGWRGGDE CVICNGVLYC LIHSTGVLGN ADLRHSLIMY DLSARSSHAS LMCMPIPVPC SLTCGRLINL KERLVMVGGI
301: AKYDRPDIIK GIGIWELNKR EWQEVARMPH RFFQGFGELD DVFASSGIED LIYIQSYGAT ALLVFDMSQK QWKWSVKCPV TKRFPLQLFT GFCFEPRLEA
401: VS

Best Arabidopsis Sequence Match ( AT3G61590.1 )
(BLAST)

001: MEAETSWTNY PYSYITYVPE AESYREQSDD EAKVETFSMD SLLPDDLLER ILSFLPIASI FRAGTVCKRW NEIVSSRRFL CNFSNNSVSQ RPWYFMFTTT
101: DDPSGYAYDP IIRKWYSFDL PCIETSNWFV ASSCGLVCFM DNDCRNKIYV SNPITKQWRT LIEPPGHKST DYTAMSTSVN RANQAVNRAN RSYSVSIVKS
201: KQVPGNFFQW DLSIHLYSSE TMTWTTLVND VLSGWRGGNE SVICNNVLYF MIYSTGGSDH RHGLIASNLS SIGSPSSGIL MRSFIPMPCS LTCGRLMNLR
301: ERLVIVGGIG KHDRPEVIKG IGIWVLKGKE WVEMAKMPQR FFQGFGEFDE VFASSGTDDL VYIQSYGSPA LLTFDMNLKY WRWSQKCPVT KKFPLQLFTG
401: FCFEPRLEIA P

Arabidopsis Description

HWSGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRL4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.