Factsheet for GSMUA_AchrUn_randomP00910_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31515	Soybean	cytosol	69.35	59.33
VIT_01s0010g03730.t01	Wine grape	cytosol	69.35	58.68
Os01t0923900-01	Rice	cytosol	65.97	57.34
PGSC0003DMT400084722	Potato	cytosol, mitochondrion	69.35	57.3
Zm00001d011994_P001	Maize	cytosol	65.71	57.11
Solyc05g015520.2.1	Tomato	cytosol	69.09	57.08
EES04122	Sorghum	cytosol	65.45	57.01
KRG97395	Soybean	cytosol	68.31	56.93
TraesCS3B01G470300.2	Wheat	cytosol	65.71	56.6
TraesCS3A01G435400.2	Wheat	cytosol	65.45	56.38
TraesCS3D01G428200.2	Wheat	cytosol	65.19	56.15
KRH42677	Soybean	cytosol, nucleus, plasma membrane	65.71	55.85
KRH58777	Soybean	cytosol	65.71	55.73
CDY27608	Canola	nucleus	64.68	53.55
Bra032820.1-P	Field mustard	nucleus	64.68	53.55
CDX84930	Canola	cytosol, plastid	64.68	53.32
AT1G27340.1	Thale cress	cytosol	63.64	52.46
Zm00001d042309_P001	Maize	cytosol	63.38	51.69
CDY03911	Canola	nucleus, plastid	61.56	51.52
Bra030038.1-P	Field mustard	nucleus, plastid	61.04	50.87
CDY15715	Canola	nucleus, plastid	60.78	50.43
GSMUA_Achr1P09520_001	Banana	cytosol	23.64	26.07
GSMUA_Achr9P05330_001	Banana	cytosol	23.38	22.39
GSMUA_Achr10P...	Banana	cytosol	23.38	21.9
GSMUA_Achr3P23630_001	Banana	plastid	21.56	21.73
GSMUA_Achr6P14190_001	Banana	cytosol	21.04	21.32
GSMUA_Achr7P11470_001	Banana	nucleus	18.96	20.74
GSMUA_Achr7P10710_001	Banana	cytosol	20.0	20.53
GSMUA_Achr3P03450_001	Banana	cytosol	19.48	20.22
GSMUA_Achr10P...	Banana	cytosol	19.74	20.0
GSMUA_Achr8P27920_001	Banana	golgi, mitochondrion, plasma membrane, plastid	21.04	15.06

Protein Annotations

Gene3D:1.20.1280.50	Gene3D:2.120.10.80	MapMan:35.1	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150
GO:GO:0009653	GO:GO:0009719	GO:GO:0009987	GO:GO:0010305	GO:GO:0010928	GO:GO:0060776
EnsemblPlantsGene:GSMUA_AchrUn_randomG00910_001	EnsemblPlants:GSMUA_AchrUn_randomP00910_001	EnsemblPlants:GSMUA_AchrUn_randomT00910_001	InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR001810	InterPro:IPR015915
InterPro:Kelch-typ_b-propeller	UniProt:M0U5A3	PFAM:PF00646	PFscan:PS50181	PANTHER:PTHR44829	SMART:SM00256
SUPFAM:SSF50965	SUPFAM:SSF81383	UniParc:UPI000294E29F	SEG:seg	:	:

Description

F-box only protein 6 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG00910_001]

Coordinates

chrchrUn_random:+:3369380..3376738

Molecular Weight (calculated)

44011.4 Da

IEP (calculated)

9.360

GRAVY (calculated)

-0.132

Length

385 amino acids

Sequence
(BLAST)

001: MVEVNKSLPC KRSRRERNPA KALALISTDL MDQQIWKDFP EDLFEAVIAR LPIDSFFRFR TVCRKWNSLL TSHSFSQHFA EVPRLHPWFY TVTPENISSA
101: AMYDPSSRKW HHFSIPFLPA KTIILPVASA GGLICFLDLG HKNFYVCNPL TNSFKELPPR SFRVWSRVAV GMILNGTTAN DGYKIVWLGC NGDHEIYDSL
201: QNSWTRNGAF PSSIKLPLSL NFRSQTVSIG NSLYFMHAEP DGILSYDVAN GAWKQFIIPS PSHLTDYTLA EYGGQVMLVG LVTKNAVTCI YIWELQKMTL
301: LWKEVDRMPN IWCLELYGKH VRMTCLGNRG LLMLSLRSRR MNRLVTYNMS SKEWQRVPEC LLPHGRKRQS IACGTAFDPC PTAFA

Best Arabidopsis Sequence Match ( AT1G27340.1 )
(BLAST)

001: MEEELAMLRQ LIGQLQELLH NGSPPPPSSS SSLSSSSPSF LVLHHPQYQN GWCLPCIEDT SADDCCDIVM AGGKRPGIFK MLETVKPPVK RTRKERTQGK
101: SCTEVDEISG NMDQEIWQEF PQDLFEDVVS RLPMATFFQF RAVCRKWNAL IDSDSFSRCF TELPQTIPWF YTITHENVNS GQVYDPSLKK WHHPIIPALP
201: KKSIVLPMAS AGGLVCFLDI GHRNFYVSNP LTKSFRELPA RSFKVWSRVA VGMTLNGNST SHGYKVLWVG CEGEYEVYDS LSNVWTKRGT IPSNIKLPVL
301: LNFKSQPVAI HSTLYFMLTD PEGILSYDMV SGKWKQFIIP GPPDLSDHTL AACGERLMLV GLLTKNAATC VCIWELQKMT LLWKEVDRMP NIWCLEFYGK
401: HIRMNCLGNK GCLILLSLRS RQMNRLITYN AVTREWTKVP GCTVPRGRKR LWIACGTAFH PSPTARA

Arabidopsis Description

FBX6F-box only protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZK1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.