CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH58777	Soybean	cytosol	92.49	92.29
KRH31515	Soybean	cytosol	74.17	74.67
KRG97395	Soybean	cytosol	75.5	74.03
VIT_01s0010g03730.t01	Wine grape	cytosol	68.21	67.91
GSMUA_AchrUn_...	Banana	cytosol	55.85	65.71
PGSC0003DMT400084722	Potato	cytosol, mitochondrion	67.55	65.67
Solyc05g015520.2.1	Tomato	cytosol	66.23	64.38
CDX84930	Canola	cytosol, plastid	61.15	59.31
CDY27608	Canola	nucleus	60.04	58.49
Bra032820.1-P	Field mustard	nucleus	60.04	58.49
AT1G27340.1	Thale cress	cytosol	59.82	58.03
CDY03911	Canola	nucleus, plastid	58.28	57.39
Bra030038.1-P	Field mustard	nucleus, plastid	58.06	56.93
CDY15715	Canola	nucleus, plastid	57.84	56.47
TraesCS3D01G428200.2	Wheat	cytosol	55.19	55.93
TraesCS3A01G435400.2	Wheat	cytosol	54.97	55.7
TraesCS3B01G470300.2	Wheat	cytosol	54.75	55.48
EES04122	Sorghum	cytosol	54.08	55.43
Os01t0923900-01	Rice	cytosol	54.08	55.3
Zm00001d011994_P001	Maize	cytosol	53.86	55.08
Zm00001d042309_P001	Maize	cytosol	52.76	50.64
KRH61403	Soybean	plastid	20.09	25.35
KRH52086	Soybean	plastid	19.21	25.0
KRH45144	Soybean	cytosol, plastid	23.62	24.43
KRH68853	Soybean	cytosol	21.63	24.32
KRH01425	Soybean	cytosol	23.4	23.45
KRH58532	Soybean	plastid	22.08	23.26
KRG97101	Soybean	cytosol	20.53	22.96
KRH42420	Soybean	plastid	22.3	22.95
KRH15449	Soybean	cytosol, mitochondrion, nucleus	19.65	22.94
KRH05328	Soybean	cytosol	19.87	22.11
KRH15707	Soybean	cytosol	19.43	21.62
KRH52288	Soybean	cytosol	19.43	21.31
KRH61620	Soybean	cytosol	19.21	21.07
KRH47995	Soybean	cytosol	12.14	20.45

Protein Annotations

Gene3D:1.20.1280.50	EntrezGene:100775721	Gene3D:2.120.10.80	MapMan:35.1	UniProt:A0A0R0IQV1	EMBL:ACUP02004822
ncoils:Coil	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	EnsemblPlantsGene:GLYMA_08G104800	GO:GO:0003674	GO:GO:0003824
GO:GO:0004842	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009653	GO:GO:0009719
GO:GO:0009987	GO:GO:0010305	GO:GO:0010928	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538
GO:GO:0031146	GO:GO:0060776	InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR001810	InterPro:IPR015915	EnsemblPlants:KRH42677
ProteinID:KRH42677	ProteinID:KRH42677.1	ProteinID:KRH42678.1	InterPro:Kelch-typ_b-propeller	PFAM:PF00646	PFscan:PS50181
PANTHER:PTHR44829	SMART:SM00256	SUPFAM:SSF50965	SUPFAM:SSF81383	UniParc:UPI0002338C8C	SEG:seg

Description

hypothetical protein

Coordinates

chr8:+:8062142..8066048

Molecular Weight (calculated)

51291.2 Da

IEP (calculated)

7.980

GRAVY (calculated)

-0.101

Length

453 amino acids

Sequence
(BLAST)

001: MEEEEEGLAM LITHLHHFSH SLSPLFFTLH PPLLSHQLPR LSFFDIDDYS LDDFCGLVMA AGKSGSSRML EPLKHPSKKS RRDRSLGKSS GRSSRDEAME
101: QQIWKKLPED LFEPVIARLP IATFFCFRSV CQRWNSLLTS QSFSQHCAQV PQANPWFYTV THEHANSGAM YDPSMKKWYH PTISTLPAEL IVLPVASAGG
201: LVCFLDIYRQ NFYVCNPLTQ SLKELPARSV RVGSRASVGM TVNGNSTSAG YKILLVGCDG EYEIYDSVTK SWSHPENMPA DIKLPLSLNF RSQAVSIDST
301: LYFMHSDPEG IVLYDMATGV WTQYIIPAPL HLTDHMLAEC DGRILLVGLL TKNAATCICI WELQKMTFLW KEVDRMPNVW CLDFYGKHVR MTCLGNKGLL
401: MLSLRSRQMN RLVTYNIASR EWVKVPACLV PHGRKRQWVA HGTAFYPCLT AMA

Best Arabidopsis Sequence Match ( AT1G27340.1 )
(BLAST)

001: MEEELAMLRQ LIGQLQELLH NGSPPPPSSS SSLSSSSPSF LVLHHPQYQN GWCLPCIEDT SADDCCDIVM AGGKRPGIFK MLETVKPPVK RTRKERTQGK
101: SCTEVDEISG NMDQEIWQEF PQDLFEDVVS RLPMATFFQF RAVCRKWNAL IDSDSFSRCF TELPQTIPWF YTITHENVNS GQVYDPSLKK WHHPIIPALP
201: KKSIVLPMAS AGGLVCFLDI GHRNFYVSNP LTKSFRELPA RSFKVWSRVA VGMTLNGNST SHGYKVLWVG CEGEYEVYDS LSNVWTKRGT IPSNIKLPVL
301: LNFKSQPVAI HSTLYFMLTD PEGILSYDMV SGKWKQFIIP GPPDLSDHTL AACGERLMLV GLLTKNAATC VCIWELQKMT LLWKEVDRMP NIWCLEFYGK
401: HIRMNCLGNK GCLILLSLRS RQMNRLITYN AVTREWTKVP GCTVPRGRKR LWIACGTAFH PSPTARA

Arabidopsis Description

FBX6F-box only protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZK1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.