CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH05328	Soybean	cytosol	92.38	92.38
KRH61620	Soybean	cytosol	78.38	77.24
KRH52288	Soybean	cytosol	76.9	75.79
VIT_04s0008g03190.t01	Wine grape	cytosol	63.39	63.39
GSMUA_Achr7P11470_001	Banana	nucleus	47.91	55.4
GSMUA_Achr10P...	Banana	cytosol	55.04	54.5
CDY71979	Canola	cytosol	51.6	53.3
Bra011423.1-P	Field mustard	nucleus	53.32	53.19
Bra037018.1-P	Field mustard	cytosol	51.35	53.18
CDX72391	Canola	cytosol	51.6	53.16
CDX75335	Canola	nucleus	52.58	52.45
CDX68951	Canola	cytosol	52.83	52.31
Solyc08g067300.1.1	Tomato	nucleus	51.11	50.24
PGSC0003DMT400019032	Potato	nucleus	51.6	50.24
Os03t0399400-01	Rice	mitochondrion	46.93	46.81
Zm00001d029442_P001	Maize	cytosol, nucleus, plastid	45.45	46.13
Os07t0617700-01	Rice	cytosol	45.7	45.81
TraesCS5B01G100300.1	Wheat	cytosol, plastid	44.96	45.52
TraesCS2A01G167400.1	Wheat	cytosol	45.95	44.84
TraesCS2D01G175100.1	Wheat	cytosol	45.45	44.36
KXG39191	Sorghum	nucleus	45.7	44.29
OQU90263	Sorghum	cytosol, mitochondrion, plastid	44.47	43.93
Zm00001d022151_P001	Maize	cytosol, mitochondrion, plastid	44.72	43.86
TraesCS2B01G193700.1	Wheat	cytosol	44.72	43.86
AT4G33160.2	Thale cress	cytosol	54.05	42.47
Zm00001d006874_P001	Maize	cytosol	42.26	42.47
TraesCS5D01G106500.1	Wheat	cytosol	44.96	40.67
TraesCS5A01G094200.1	Wheat	cytosol	44.72	40.27
HORVU5Hr1G025530.5	Barley	cytosol	35.14	35.22
HORVU2Hr1G030810.1	Barley	plastid	45.7	34.07
KRH61403	Soybean	plastid	18.92	21.45
KRH52086	Soybean	plastid	18.18	21.26
KRH58532	Soybean	plastid	22.11	20.93
KRH42420	Soybean	plastid	22.36	20.68
KRH31515	Soybean	cytosol	22.85	20.67
KRH68853	Soybean	cytosol	20.39	20.6
KRH15449	Soybean	cytosol, mitochondrion, nucleus	19.41	20.36
KRG97101	Soybean	cytosol	20.15	20.25
KRH45144	Soybean	cytosol, plastid	21.13	19.63
KRH42677	Soybean	cytosol, nucleus, plasma membrane	21.62	19.43
KRH58777	Soybean	cytosol	21.38	19.16
KRG97395	Soybean	cytosol	21.62	19.05
KRH01425	Soybean	cytosol	20.39	18.36
KRH47995	Soybean	cytosol	11.3	17.1

Protein Annotations

Gene3D:1.20.1280.50	EntrezGene:100797130	MapMan:35.1	EMBL:ACUP02008631	InterPro:F-box-like_dom_sf	InterPro:F-box_dom
EnsemblPlantsGene:GLYMA_14G105800	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016567
GO:GO:0016740	GO:GO:0019538	GO:GO:0031146	InterPro:Gal_Oxase/kelch_b-propeller	UniProt:I1M9B3	InterPro:IPR001810
EnsemblPlants:KRH15707	ProteinID:KRH15707	ProteinID:KRH15707.1	PFAM:PF00646	PFscan:PS50181	PANTHER:PTHR45094
PANTHER:PTHR45094:SF2	SMART:SM00256	SUPFAM:SSF50965	SUPFAM:SSF81383	UniParc:UPI0001BA89F0	SEG:seg

Description

hypothetical protein

Coordinates

chr14:+:10911008..10913393

Molecular Weight (calculated)

45613.4 Da

IEP (calculated)

4.849

GRAVY (calculated)

-0.036

Length

407 amino acids

Sequence
(BLAST)

001: MEHSLKRKSP ESGDNLLFSS FSLDDLNEDL LERVLSWLPT SSFFRLTSVC KRWKSAAASV SFKLACSRVP LRDPWFLMVA PNLNQSIVFD TAENSWKRLN
101: HPHLPLKDSN ISCMPVAASG GLVCYRKLSG NFIVCNPVTG SCTELPPLHF TPENQSLNAV VMSTTFNDQL SYKIVLVFGE LPNLLFKVYN SSSGCWEDEA
201: ALRRNVDDNS LDCDSTDDDN VVYFLSKAGT VVASSMHRSP SKQYSSVITN KEGQETVYFL SSSGMVVACN LTSKYFFEYP RLLPVFSEYS IDIVECGSEM
301: LVVLLSEFLE SASLRVWKYD EANRCWKQIA AMPAAMSQEW YGKKADINCV GAGDRIFICL NSPELCAYVL CDLVTNKWTE LPKCCLNGEL MEFMSAFSFE
401: PRIEASV

Best Arabidopsis Sequence Match ( AT4G33160.2 )
(BLAST)

001: MFTGYSFGFG DSSEEEVAQH TIFPFLLVSL SPQEYLLCRG LSTLFDRGAQ EASLLSLSLS SMPSSATSTY LLSLKQVSLT ASSPLLLQLK DRFFHQPKLL
101: NMGFSTGKRK SRDEEEDRVS FFASEFPMDD LNDDVLERVL SWLPTSCFFR MSSVCKRWKS SQTSKSFKLA CSQIPTRDPW FFMIDNDSNS SSFVFDSTEN
201: SWKNLNRRDF LHHHRQDFIP VASSGGLLCY RCSISGDFLL RNPLTGSSRD IPSQDNNNNK PLQAVAMTTT TVTPSSYTLV TISGEIPNLS FKIYESNADS
301: WSKDQELESV KNNDSSLHDD YDTDSGTVYF LSKQGNVVVA SNNLQRSPSK QYSSVITVTD EAEIVYFLSS YGTIVACDLT KRCFTELPKL LPPFLEYSID
401: LVECEGTMYV ILLSEFFESA SLRIWRLDNN REWVQVGMLP PALSHELYGK KGDINCVGGA GNKILVCFNA SPPEVYCRYF VYDLVAEEWN ELPKCFKDGE
501: AVDFVSALSF QPRIEATV

Arabidopsis Description

F-box family protein [Source:TAIR;Acc:AT4G33160]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.