CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d022151_P001	Maize	cytosol, mitochondrion, plastid	88.35	87.71
Zm00001d006874_P001	Maize	cytosol	84.71	86.17
Os07t0617700-01	Rice	cytosol	69.66	70.69
TraesCS2A01G167400.1	Wheat	cytosol	68.69	67.87
TraesCS2D01G175100.1	Wheat	cytosol	68.45	67.63
TraesCS2B01G193700.1	Wheat	cytosol	67.23	66.75
KXG39191	Sorghum	nucleus	65.53	64.29
HORVU2Hr1G030810.1	Barley	plastid	68.2	51.47
GSMUA_Achr7P11470_001	Banana	nucleus	40.29	47.16
KRH15707	Soybean	cytosol	43.93	44.47
VIT_04s0008g03190.t01	Wine grape	cytosol	43.69	44.23
KRH05328	Soybean	cytosol	43.69	44.23
GSMUA_Achr10P...	Banana	cytosol	43.93	44.04
CDX72391	Canola	cytosol	40.53	42.28
CDY71979	Canola	cytosol	40.29	42.13
Bra037018.1-P	Field mustard	cytosol	39.81	41.73
KRH61620	Soybean	cytosol	41.5	41.4
KRH52288	Soybean	cytosol	41.26	41.16
CDX75335	Canola	nucleus	39.08	39.46
PGSC0003DMT400019032	Potato	nucleus	39.81	39.23
Bra011423.1-P	Field mustard	nucleus	38.84	39.22
Solyc08g067300.1.1	Tomato	nucleus	39.32	39.13
CDX68951	Canola	cytosol	38.84	38.93
AT4G33160.2	Thale cress	cytosol	39.56	31.47
EES01202	Sorghum	cytosol	18.69	18.97
EES04122	Sorghum	cytosol	19.9	18.55
EES11618	Sorghum	plastid	18.93	18.48
KXG29968	Sorghum	cytosol	17.96	18.14
OQU76836	Sorghum	plastid	17.96	17.17

Protein Annotations

Gene3D:1.20.1280.50	Gene3D:2.120.10.80	MapMan:35.1	UniProt:A0A1W0W7E3	InterPro:F-box-like_dom_sf	InterPro:F-box_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR001810	InterPro:IPR015915
InterPro:Kelch-typ_b-propeller	EnsemblPlants:OQU90263	ProteinID:OQU90263	ProteinID:OQU90263.1	PFAM:PF00646	PFscan:PS50181
PANTHER:PTHR45094	PANTHER:PTHR45094:SF1	SMART:SM00256	EnsemblPlantsGene:SORBI_3002G375701	SUPFAM:SSF50965	SUPFAM:SSF81383
UniParc:UPI0009DC81FA	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:73315541..73316779

Molecular Weight (calculated)

43849.7 Da

IEP (calculated)

6.666

GRAVY (calculated)

-0.142

Length

412 amino acids

Sequence
(BLAST)

001: MAATLDGAAG GKKRKRAAPG LADLHDDMLE RVLARLPPAS YFRLRGVSRR WRAAAESRTF RAACARVTAR DPWFLMLEDP DHQYQDQDER RPRPAAVFDS
101: AERAWARWRG APGPLQPVAA AGGLLLYRDP GTGDLTVVNP LTGASRALPP PPPTPTRALQ AVAMYGSPYR VVLILGELPD LSTVVYDSST NAWGDEAALS
201: RKPAEDAASS REERVAEADG DDTVYFLSKS GDVVATTMQR SASRQYSSAV ACREGGGGDA VAYFLSRSGT VVACDLSRRA FAELPRILPA YHEYSIDVVA
301: CGGAAYAVVL SEFLDAASLR VWEFAGGAWR QVAAMPPAMA HAFRGAKADV NCVGHGGRVM VCVSSSTAAG ASGCFMCDVR TNRWEELAGG DGDAATGFVA
401: ALSFEPRMEA AV

Best Arabidopsis Sequence Match ( AT4G33160.1 )
(BLAST)

001: MPSSATSTYL LSLKQVSLTA SSPLLLQLKD RFFHQPKLLN MGFSTGKRKS RDEEEDRVSF FASEFPMDDL NDDVLERVLS WLPTSCFFRM SSVCKRWKSS
101: QTSKSFKLAC SQIPTRDPWF FMIDNDSNSS SFVFDSTENS WKNLNRRDFL HHHRQDFIPV ASSGGLLCYR CSISGDFLLR NPLTGSSRDI PSQDNNNNKP
201: LQAVAMTTTT VTPSSYTLVT ISGEIPNLSF KIYESNADSW SKDQELESVK NNDSSLHDDY DTDSGTVYFL SKQGNVVVAS NNLQRSPSKQ YSSVITVTDE
301: AEIVYFLSSY GTIVACDLTK RCFTELPKLL PPFLEYSIDL VECEGTMYVI LLSEFFESAS LRIWRLDNNR EWVQVGMLPP ALSHELYGKK GDINCVGGAG
401: NKILVCFNAS PPEVYCRYFV YDLVAEEWNE LPKCFKDGEA VDFVSALSFQ PRIEATV

Arabidopsis Description

F-box family protein [Source:TAIR;Acc:AT4G33160]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.