CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043989_P001	Maize	cytosol	91.63	92.54
TraesCS3D01G239300.1	Wheat	cytosol	79.06	79.85
TraesCS3A01G239100.1	Wheat	cytosol	79.06	79.85
TraesCS3B01G267600.1	Wheat	cytosol	78.57	79.35
HORVU3Hr1G059460.1	Barley	cytosol	78.33	79.1
Os01t0659900-01	Rice	cytosol	80.05	79.08
GSMUA_Achr9P05330_001	Banana	cytosol	66.5	67.16
KRH68853	Soybean	cytosol	59.11	59.55
KRG97101	Soybean	cytosol	59.11	59.26
Solyc01g095370.2.1	Tomato	cytosol	58.37	58.66
VIT_15s0046g01540.t01	Wine grape	cytosol	59.36	58.35
PGSC0003DMT400000251	Potato	cytosol	58.13	58.27
KXG29968	Sorghum	cytosol	58.13	57.84
Bra007616.1-P	Field mustard	cytosol	56.65	56.93
CDY52009	Canola	nucleus	56.9	56.76
CDY53910	Canola	cytosol	56.65	56.37
Bra003458.1-P	Field mustard	nucleus	56.65	56.37
CDX89124	Canola	cytosol	55.66	55.26
VIT_02s0025g00830.t01	Wine grape	cytosol	55.17	55.17
KRH47995	Soybean	cytosol	36.21	54.65
CDY43939	Canola	cytosol	55.91	54.44
Bra014429.1-P	Field mustard	cytosol	55.66	53.68
CDX71729	Canola	mitochondrion	56.9	52.03
AT3G61590.4	Thale cress	plasma membrane	55.42	50.34
CDY11364	Canola	cytosol, golgi, nucleus	56.4	50.33
GSMUA_Achr8P27920_001	Banana	golgi, mitochondrion, plasma membrane, plastid	60.1	45.35
EES11618	Sorghum	plastid	22.66	21.8
KXG39191	Sorghum	nucleus	20.94	20.24
EES04122	Sorghum	cytosol	21.43	19.68
OQU76836	Sorghum	plastid	20.69	19.49
OQU90263	Sorghum	cytosol, mitochondrion, plastid	18.97	18.69

Protein Annotations

Gene3D:1.20.1280.50	MapMan:19.2.2.8.1.4.6	EntrezGene:8061806	UniProt:C5XFC2	EnsemblPlants:EES01202	ProteinID:EES01202
ProteinID:EES01202.1	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR001810	PFAM:PF12937	PFscan:PS50181	PANTHER:PTHR10706	PANTHER:PTHR10706:SF138
SMART:SM00256	EnsemblPlantsGene:SORBI_3003G244400	SUPFAM:SSF50965	SUPFAM:SSF81383	UniParc:UPI0001A84557	RefSeq:XP_002456082.1

Description

hypothetical protein

Coordinates

chr3:+:58382282..58387226

Molecular Weight (calculated)

45898.1 Da

IEP (calculated)

6.367

GRAVY (calculated)

-0.031

Length

406 amino acids

Sequence
(BLAST)

001: MIHLMEDHSS WDYLPVDHIR IPAFNSGVVS EASNGGNDFS VSLDAVVPDD ILERIFTFLP IASMMRATAV CKRWHGIIYS SRVVWTHMLP QRPWYFMFTS
101: NETAAGYAFD PILRKWYDLE LPYIDKSSCF VSSSCGLVCF MDNDNRNTIS VSNPITKSCR RLLEPPGETL PDYSTIAMKV DRLSHKYSVT LAKSKQIPED
201: FVRWDFSVYK YDSSSGTWAT SVSEVFIGWR GGDDSVICDG VLYCLIHSTG VLGNVNPRHG LIMYDLAGEP SETSLMQTSI SVPCSLTCGR LVNLKEKLVL
301: VGGIAKHNRP DIIKGIGIWE LHEKQWHEVA RMPHKFFQGF GELDDVFACS GIDDLVYIQS YGATALLVFD MMQKQWKWSL KCPVSKRFPL QLFTGFCFEP
401: RLDIAA

Best Arabidopsis Sequence Match ( AT3G61590.1 )
(BLAST)

001: MEAETSWTNY PYSYITYVPE AESYREQSDD EAKVETFSMD SLLPDDLLER ILSFLPIASI FRAGTVCKRW NEIVSSRRFL CNFSNNSVSQ RPWYFMFTTT
101: DDPSGYAYDP IIRKWYSFDL PCIETSNWFV ASSCGLVCFM DNDCRNKIYV SNPITKQWRT LIEPPGHKST DYTAMSTSVN RANQAVNRAN RSYSVSIVKS
201: KQVPGNFFQW DLSIHLYSSE TMTWTTLVND VLSGWRGGNE SVICNNVLYF MIYSTGGSDH RHGLIASNLS SIGSPSSGIL MRSFIPMPCS LTCGRLMNLR
301: ERLVIVGGIG KHDRPEVIKG IGIWVLKGKE WVEMAKMPQR FFQGFGEFDE VFASSGTDDL VYIQSYGSPA LLTFDMNLKY WRWSQKCPVT KKFPLQLFTG
401: FCFEPRLEIA P

Arabidopsis Description

HWSGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRL4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.