Factsheet for HORVU3Hr1G059460.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G239300.1	Wheat	cytosol	98.26	98.26
TraesCS3B01G267600.1	Wheat	cytosol	97.51	97.51
TraesCS3A01G239100.1	Wheat	cytosol	97.51	97.51
Os01t0659900-01	Rice	cytosol	82.09	80.29
EES01202	Sorghum	cytosol	79.1	78.33
Zm00001d043989_P001	Maize	cytosol	76.62	76.62
GSMUA_Achr9P05330_001	Banana	cytosol	65.92	65.92
KRH68853	Soybean	cytosol	57.96	57.82
PGSC0003DMT400000251	Potato	cytosol	57.96	57.53
Solyc01g095370.2.1	Tomato	cytosol	57.71	57.43
VIT_15s0046g01540.t01	Wine grape	cytosol	58.96	57.38
KRG97101	Soybean	cytosol	56.72	56.3
Bra003458.1-P	Field mustard	nucleus	55.97	55.15
CDY53910	Canola	cytosol	55.72	54.9
CDY52009	Canola	nucleus	55.47	54.79
Bra007616.1-P	Field mustard	cytosol	54.98	54.7
VIT_02s0025g00830.t01	Wine grape	cytosol	54.98	54.43
CDX89124	Canola	cytosol	54.98	54.03
CDY43939	Canola	cytosol	55.22	53.24
Bra014429.1-P	Field mustard	cytosol	54.98	52.49
KRH47995	Soybean	cytosol	34.58	51.67
CDX71729	Canola	mitochondrion	54.98	49.77
CDY11364	Canola	cytosol, golgi, nucleus	54.73	48.35
AT3G61590.4	Thale cress	plasma membrane	53.48	48.1
GSMUA_Achr8P27920_001	Banana	golgi, mitochondrion, plasma membrane, plastid	60.45	45.17
HORVU2Hr1G118340.2	Barley	cytosol	20.9	22.4
HORVU7Hr1G108970.1	Barley	cytosol, plasma membrane, plastid	19.15	17.58
HORVU2Hr1G030810.1	Barley	plastid	16.92	12.45
HORVU5Hr1G025530.5	Barley	cytosol	11.19	11.08

Protein Annotations

EnsemblPlants:HORVU3Hr1G059460.1	EnsemblPlantsGene:HORVU3Hr1G059460	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0007275	GO:GO:0008150	GO:GO:0099402	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:Gal_Oxase/kelch_b-propeller
InterPro:IPR001810	PANTHER:PTHR10706	PANTHER:PTHR10706:SF138	PFAM:PF12937	PFscan:PS50181	SMART:SM00256
SUPFAM:SSF50965	SUPFAM:SSF81383	UniParc:UPI00029484E7	UniProt:M0Y2L9	MapMan:19.2.2.8.1.4.6	:

Description

No Description!

Coordinates

chrchr3H:-:451374074..451376950

Molecular Weight (calculated)

45736.8 Da

IEP (calculated)

6.173

GRAVY (calculated)

-0.121

Length

402 amino acids

Sequence
(BLAST)

001: MEDDSSWEAL PIERIRVPAF NFRVISEASN GENELPVSLD AVVPGDILEK IFTFLPIASM IRSTAVCKRW HDIIYSSRYL WTHMLPQRPW YFMFTCNETA
101: SGYAYDPILH KWYDLELQGI DKSSCFVSSS CGLVCFMDND NRNIISVSNP ITKDWKRLLE PPGAKFPDYS TVAIKVDQVT HNYTVTLAKS KQVPEDYVQW
201: EFSLYRYDSW SSSWVTAVKE VFIGWRGGDD SVICGGVLYC LIQSTGVLGN VEPRHRLIMY DLVAGPSETS LTQSSIPVPC SLTCGRLLNL REKLVMVGGI
301: AKPNRPDIIK GIGIWELDRT QWQEVSRMPH KFFQGFGELD DVFCSGGADH LVYIQSYGAT ALLGFDMKQR QWKWSAKCPV SKKFPLQLFT GFCFEPRLDI
401: TT

Best Arabidopsis Sequence Match ( AT3G61590.3 )
(BLAST)

001: MIDDRLLRME AETSWTNYPY SYITYVPEAE SYREQSDDEA KVETFSMDSL LPDDLLERIL SFLPIASIFR AGTVCKRWNE IVSSRRFLCN FSNNSVSQRP
101: WYFMFTTTDD PSGYAYDPII RKWYSFDLPC IETSNWFVAS SCGLVCFMDN DCRNKIYVSN PITKQWRTLI EPPGHKSTDY TAMSTSVNRA NQAVNRANRS
201: YSVSIVKSKQ VPGNFFQWDL SIHLYSSETM TWTTLVNDVL SGWRGGNESV ICNNVLYFMI YSTGGSDHRH GLIASNLSSI GSPSSGILMR SFIPMPCSLT
301: CGRLMNLRER LVIVGGIGKH DRPEVIKGIG IWVLKGKEWV EMAKMPQRFF QGFGEFDEVF ASSGTDDLVY IQSYGSPALL TFDMNLKYWR WSQKCPVTKK
401: FPLQLFTGFC FEPRLEIAP

Arabidopsis Description

HWSGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRL4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.