CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, golgi, mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007616.1-P	Field mustard	cytosol	88.29	97.03
CDY11364	Canola	cytosol, golgi, nucleus	95.5	93.19
CDX89124	Canola	cytosol	82.21	89.24
CDY53910	Canola	cytosol	80.63	87.75
CDY43939	Canola	cytosol	81.53	86.81
CDY52009	Canola	nucleus	78.6	85.75
AT3G61590.4	Thale cress	plasma membrane	78.6	78.08
Solyc01g095370.2.1	Tomato	cytosol	61.04	67.08
PGSC0003DMT400000251	Potato	cytosol	61.04	66.91
KRH68853	Soybean	cytosol	57.88	63.77
KRG97101	Soybean	cytosol	57.88	63.46
VIT_02s0025g00830.t01	Wine grape	cytosol	56.31	61.58
GSMUA_Achr9P05330_001	Banana	cytosol	55.18	60.95
KRH47995	Soybean	cytosol	36.04	59.48
GSMUA_Achr3P03450_001	Banana	cytosol	49.1	58.76
GSMUA_Achr6P14190_001	Banana	cytosol	49.77	58.16
GSMUA_Achr7P10710_001	Banana	cytosol	48.65	57.6
EES01202	Sorghum	cytosol	52.03	56.9
Zm00001d043989_P001	Maize	cytosol	51.35	56.72
GSMUA_Achr10P...	Banana	cytosol	48.42	56.58
KXG29968	Sorghum	cytosol	51.8	56.37
Zm00001d053358_P001	Maize	cytosol	50.9	55.8
TraesCS3D01G239300.1	Wheat	cytosol	50.23	55.47
TraesCS3A01G239100.1	Wheat	cytosol	50.23	55.47
Zm00001d016066_P001	Maize	cytosol	51.8	55.42
Os02t0260200-01	Rice	cytosol, endoplasmic reticulum	50.9	55.39
TraesCS3B01G267600.1	Wheat	cytosol	49.77	54.98
HORVU3Hr1G059460.1	Barley	cytosol	49.77	54.98
Os01t0659900-01	Rice	cytosol	50.23	54.26
GSMUA_Achr8P27920_001	Banana	golgi, mitochondrion, plasma membrane, plastid	51.35	42.38
CDX70633	Canola	cytosol, plastid	22.52	23.04
CDX78648	Canola	cytosol, plastid	22.52	22.99
CDY32964	Canola	plastid	19.82	22.11
CDX84930	Canola	cytosol, plastid	23.2	22.06
CDY43599	Canola	plastid	19.82	21.84
CDY27608	Canola	nucleus	22.75	21.72
CDX75335	Canola	nucleus	19.82	21.57
CDY03911	Canola	nucleus, plastid	22.07	21.3
CDY52183	Canola	plastid	21.4	21.3
CDY12448	Canola	plastid	21.4	21.3
CDY15715	Canola	nucleus, plastid	22.07	21.12
CDX68951	Canola	cytosol	19.37	20.92
CDY71979	Canola	cytosol	17.79	20.05
CDX72391	Canola	cytosol	17.79	20.0

Protein Annotations

Gene3D:1.20.1280.50	MapMan:19.2.2.8.1.4.6	GO:A0A078C6E5	EnsemblPlants:CDX71729	ProteinID:CDX71729	ProteinID:CDX71729.1
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00155421001
InterPro:IPR001810	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	PFAM:PF12937	PFscan:PS50181	PANTHER:PTHR10706
PANTHER:PTHR10706:SF138	SMART:SM00256	SUPFAM:SSF117281	SUPFAM:SSF81383	TMHMM:TMhelix	UniParc:UPI0004EE0548
SEG:seg	:	:	:	:	:

Description

BnaC08g31450D

Coordinates

chrLK031795:-:168057..172223

Molecular Weight (calculated)

50942.6 Da

IEP (calculated)

7.584

GRAVY (calculated)

-0.249

Length

444 amino acids

Sequence
(BLAST)

001: MWYFACRLIF NYKIIKRNKV TGYLMWYVIF SYPFWLQRME AETSWTHYPY NYVPEAETYS EPSDDETKDQ TFSMDTLLPD DLLERILSFL PIASIFRAGT
101: VCKRWNEIVS SRRFLWNFSS NNNNSASQRP WYFMFTSTDD PSGYAYDPVI KKWYTFDLPC IETSNWFVAS SCGLVCFMDN DCRNKIYVSN PITKQWRRLI
201: EPPGHRSTDY TALSTSMNRA KQSYSVSVVK SKQVQGNFFQ WELSIHLYSS ETMTWTTSLT DVLTGWRGGD ESVIIDNVLY FLIYSTGGSS DHRHGLIASS
301: LSSTSSLMSS FIPMPCSLTC GRLMNLKERL VVVGGIGKHD RPDIIKGIGI WCLKGGGGGG GGEWQEMARM PQRYFQGFGE LDDVFASSGS DDVVYIQSYG
401: SPALLTFDMK LKCWKWSQKC PVSKKFPLQL FTGFCFEPRL EIAP

Best Arabidopsis Sequence Match ( AT3G61590.1 )
(BLAST)

001: MEAETSWTNY PYSYITYVPE AESYREQSDD EAKVETFSMD SLLPDDLLER ILSFLPIASI FRAGTVCKRW NEIVSSRRFL CNFSNNSVSQ RPWYFMFTTT
101: DDPSGYAYDP IIRKWYSFDL PCIETSNWFV ASSCGLVCFM DNDCRNKIYV SNPITKQWRT LIEPPGHKST DYTAMSTSVN RANQAVNRAN RSYSVSIVKS
201: KQVPGNFFQW DLSIHLYSSE TMTWTTLVND VLSGWRGGNE SVICNNVLYF MIYSTGGSDH RHGLIASNLS SIGSPSSGIL MRSFIPMPCS LTCGRLMNLR
301: ERLVIVGGIG KHDRPEVIKG IGIWVLKGKE WVEMAKMPQR FFQGFGEFDE VFASSGTDDL VYIQSYGSPA LLTFDMNLKY WRWSQKCPVT KKFPLQLFTG
401: FCFEPRLEIA P

Arabidopsis Description

HWSGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRL4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.