Factsheet for Os02t0260200-01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

endoplasmic reticulum: 21447055

gfp PMID: 21447055 doi

M Li, D Tang, K Wang, X Wu, L Lu, H Yu, M Gu, C Yan, Z Cheng

State Key Laboratory of Plant Genomics and Center for Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG29968	Sorghum	cytosol	86.27	86.27
Zm00001d053358_P001	Maize	cytosol	83.09	83.7
Zm00001d016066_P001	Maize	cytosol	79.17	77.83
GSMUA_Achr10P...	Banana	cytosol	67.4	72.37
GSMUA_Achr6P14190_001	Banana	cytosol	66.91	71.84
GSMUA_Achr3P03450_001	Banana	cytosol	63.97	70.35
GSMUA_Achr7P10710_001	Banana	cytosol	63.48	69.07
KRH68853	Soybean	cytosol	57.35	58.06
Solyc01g095370.2.1	Tomato	cytosol	57.35	57.92
PGSC0003DMT400000251	Potato	cytosol	57.35	57.78
VIT_15s0046g01540.t01	Wine grape	cytosol	58.33	57.63
KRG97101	Soybean	cytosol	57.11	57.53
Bra007616.1-P	Field mustard	cytosol	55.88	56.44
Os01t0659900-01	Rice	cytosol	56.62	56.2
KRH47995	Soybean	cytosol	36.52	55.39
VIT_02s0025g00830.t01	Wine grape	cytosol	54.41	54.68
Bra003458.1-P	Field mustard	nucleus	54.66	54.66
CDY52009	Canola	nucleus	54.41	54.55
CDY53910	Canola	cytosol	54.41	54.41
CDX89124	Canola	cytosol	54.17	54.03
Bra014429.1-P	Field mustard	cytosol	54.17	52.49
CDY43939	Canola	cytosol	53.43	52.28
CDX71729	Canola	mitochondrion	55.39	50.9
CDY11364	Canola	cytosol, golgi, nucleus	55.39	49.67
AT3G61590.4	Thale cress	plasma membrane	54.41	49.66
Os04t0668600-01	Rice	plastid	23.04	22.38
Os01t0923900-01	Rice	cytosol	21.81	20.09
Os07t0617700-01	Rice	cytosol	17.16	17.24
Os03t0399400-01	Rice	mitochondrion	17.16	17.16
Os06t0665400-01	Rice	plastid	17.65	16.78

Protein Annotations

Gene3D:1.20.1280.50	MapMan:19.2.2.8.1.4.6	Gene3D:2.120.10.80	ProteinID:BAF08395.1	ProteinID:BAS77982.1	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR001810
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	EnsemblPlantsGene:Os02g0260200	EnsemblPlants:Os02t0260200-01	PFAM:PF12937	PFscan:PS50181
PANTHER:PTHR10706	PANTHER:PTHR10706:SF140	UniProt:Q0E293	SMART:SM00256	SUPFAM:SSF50965	SUPFAM:SSF81383
UniParc:UPI000043DF23	:	:	:	:	:

Description

ERECT PANICLE 3Cyclin-like F-box domain containing protein. (Os02t0260200-01)

Coordinates

chr2:+:9042134..9044852

Molecular Weight (calculated)

46358.5 Da

IEP (calculated)

5.423

GRAVY (calculated)

-0.098

Length

408 amino acids

Sequence
(BLAST)

001: MLAMGSEEWE LYPSSFIGAQ VIDYGHVSGD MDDDQSGDLA VSMDAVLPDD LLEKVLSFLP VASVIRSGSV CKRWHEIVHA RRQTWSKMVP QKPWYFMFTC
101: SEEAVSGFTY DPSLRKWYGF DFPCIEKTTW SISSSSGLVC LMDSEDRSRI IVCNPITKDW KRLVDAPGGK SADYSALAIS VTRTSHQYMV AVARCNQVPS
201: EYYQWEFTIH LYESEINTWV SPFTELLIGW RGGDECVICD GVLYYLVYST GVLVNNNEHR HCLLMYDLST RPTHTSLMSM AIPVPCPLTC GRLMNLNERL
301: VLVGGIGKQD RPGIIKGIGI WELRNKEWHE VARMPHKFFQ GFGEFDDVFA SCGADDLIYI QSYGSPALLT FELNQKLWKW SLKSPVTKRF PLQLFTGFSF
401: EPRLDIAS

Best Arabidopsis Sequence Match ( AT3G61590.4 )
(BLAST)

001: MLDKVLILSL FFVFCIFDLP LCMYAKANLI DKRLLRMEAE TSWTNYPYSY ITYVPEAESY REQSDDEAKV ETFSMDSLLP DDLLERILSF LPIASIFRAG
101: TVCKRWNEIV SSRRFLCNFS NNSVSQRPWY FMFTTTDDPS GYAYDPIIRK WYSFDLPCIE TSNWFVASSC GLVCFMDNDC RNKIYVSNPI TKQWRTLIEP
201: PGHKSTDYTA MSTSVNRANQ AVNRANRSYS VSIVKSKQVP GNFFQWDLSI HLYSSETMTW TTLVNDVLSG WRGGNESVIC NNVLYFMIYS TGGSDHRHGL
301: IASNLSSIGS PSSGILMRSF IPMPCSLTCG RLMNLRERLV IVGGIGKHDR PEVIKGIGIW VLKGKEWVEM AKMPQRFFQG FGEFDEVFAS SGTDDLVYIQ
401: SYGSPALLTF DMNLKYWRWS QKCPVTKKFP LQLFTGFCFE PRLEIAP

Arabidopsis Description

HWSGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRL4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.