Factsheet for Os03t0399400-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
nucleus 2
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029442_P001	Maize	cytosol, nucleus, plastid	75.74	77.06
KXG39191	Sorghum	nucleus	76.47	74.29
TraesCS5B01G100300.1	Wheat	cytosol, plastid	72.06	73.13
Os07t0617700-01	Rice	cytosol	67.65	67.98
TraesCS5D01G106500.1	Wheat	cytosol	72.3	65.56
TraesCS5A01G094200.1	Wheat	cytosol	71.32	64.38
HORVU5Hr1G025530.5	Barley	cytosol	58.33	58.62
GSMUA_Achr7P11470_001	Banana	nucleus	41.42	48.01
KRH15707	Soybean	cytosol	46.81	46.93
KRH05328	Soybean	cytosol	46.57	46.68
VIT_04s0008g03190.t01	Wine grape	cytosol	45.83	45.95
KRH52288	Soybean	cytosol	45.34	44.79
KRH61620	Soybean	cytosol	45.34	44.79
GSMUA_Achr10P...	Banana	cytosol	44.61	44.28
CDX72391	Canola	cytosol	39.71	41.01
CDY71979	Canola	cytosol	39.46	40.86
Bra037018.1-P	Field mustard	cytosol	39.22	40.71
CDX68951	Canola	cytosol	40.2	39.9
Solyc08g067300.1.1	Tomato	nucleus	40.44	39.86
Bra011423.1-P	Field mustard	nucleus	39.46	39.46
CDX75335	Canola	nucleus	39.46	39.46
PGSC0003DMT400019032	Potato	nucleus	39.95	39.0
AT4G33160.2	Thale cress	cytosol	41.18	32.43
Os06t0665400-01	Rice	plastid	20.34	19.35
Os04t0668600-01	Rice	plastid	19.85	19.29
Os01t0659900-01	Rice	cytosol	19.12	18.98
Os01t0923900-01	Rice	cytosol	20.59	18.96
Os02t0260200-01	Rice	cytosol, endoplasmic reticulum	17.16	17.16

Protein Annotations

Gene3D:1.20.1280.50	MapMan:35.1	EntrezGene:4333050	ProteinID:AAK55468.1	ProteinID:AAP12928.1	ProteinID:ABF96450.1
ProteinID:BAF12221.1	ProteinID:BAS84586.1	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0004842	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0031146
InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR001810	EnsemblPlantsGene:Os03g0399400	EnsemblPlants:Os03t0399400-01	PFAM:PF00646	PFscan:PS50181
PANTHER:PTHR45094	UniProt:Q94LF5	SMART:SM00256	SUPFAM:SSF50965	SUPFAM:SSF81383	UniParc:UPI00000AA773
RefSeq:XP_015629982.1	SEG:seg	:	:	:	:

Description

F-box protein 150Cyclin-like F-box domain containing protein. (Os03t0399400-01)

Coordinates

chr3:-:16171366..16172869

Molecular Weight (calculated)

42939.0 Da

IEP (calculated)

7.394

GRAVY (calculated)

0.016

Length

408 amino acids

Sequence
(BLAST)

001: MASMAARSSR KRRSPPPRGL GDLHDDVLER VLARLPPATF FRLRAVCRRW SAAAASPTFL RACARVPSRD PWFLMLSGAR PRPPLAFDAA GRSWIPCRAA
101: PGGSDGGADA AVPVASSGGL VLYRAPGTGE LLVANPLTGA SRALPSPPGA HGGAPRLHAI AMYGSPYRVA LFADELPDLS MSVFDSSRGS WEGPVALSRR
201: PDAAALLPDD APSQGGADDT VYFLSKSGDV VATNMQRSAS KQYSSVVVAA SSDGGDAVAY FLSHSGTVVA CDTARRTFAE LPRILPVYFE YSIDVVACDG
301: AAYAVVLAEY LDTASLRVWG FAGGAWRQVA AMPPAMSHAF HGKKADINCV GHGGRLMVCV SSGEANGCFM CDVGSNQWEE LPKCVNGDGE VNDFLAAFSF
401: EPRLEISV

Best Arabidopsis Sequence Match ( AT4G33160.1 )
(BLAST)

001: MPSSATSTYL LSLKQVSLTA SSPLLLQLKD RFFHQPKLLN MGFSTGKRKS RDEEEDRVSF FASEFPMDDL NDDVLERVLS WLPTSCFFRM SSVCKRWKSS
101: QTSKSFKLAC SQIPTRDPWF FMIDNDSNSS SFVFDSTENS WKNLNRRDFL HHHRQDFIPV ASSGGLLCYR CSISGDFLLR NPLTGSSRDI PSQDNNNNKP
201: LQAVAMTTTT VTPSSYTLVT ISGEIPNLSF KIYESNADSW SKDQELESVK NNDSSLHDDY DTDSGTVYFL SKQGNVVVAS NNLQRSPSKQ YSSVITVTDE
301: AEIVYFLSSY GTIVACDLTK RCFTELPKLL PPFLEYSIDL VECEGTMYVI LLSEFFESAS LRIWRLDNNR EWVQVGMLPP ALSHELYGKK GDINCVGGAG
401: NKILVCFNAS PPEVYCRYFV YDLVAEEWNE LPKCFKDGEA VDFVSALSFQ PRIEATV

Arabidopsis Description

F-box family protein [Source:TAIR;Acc:AT4G33160]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.