Factsheet for Os01t0659900-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G239300.1	Wheat	cytosol	81.02	82.84
TraesCS3B01G267600.1	Wheat	cytosol	81.02	82.84
TraesCS3A01G239100.1	Wheat	cytosol	80.54	82.34
HORVU3Hr1G059460.1	Barley	cytosol	80.29	82.09
EES01202	Sorghum	cytosol	79.08	80.05
Zm00001d043989_P001	Maize	cytosol	76.89	78.61
GSMUA_Achr9P05330_001	Banana	cytosol	66.91	68.41
VIT_15s0046g01540.t01	Wine grape	cytosol	60.83	60.53
Solyc01g095370.2.1	Tomato	cytosol	58.15	59.16
KRH68853	Soybean	cytosol	57.91	59.06
PGSC0003DMT400000251	Potato	cytosol	58.15	59.01
KRG97101	Soybean	cytosol	57.42	58.27
Os02t0260200-01	Rice	cytosol, endoplasmic reticulum	56.2	56.62
VIT_02s0025g00830.t01	Wine grape	cytosol	54.5	55.17
Bra007616.1-P	Field mustard	cytosol	54.01	54.95
Bra003458.1-P	Field mustard	nucleus	54.26	54.66
CDY53910	Canola	cytosol	54.26	54.66
CDY52009	Canola	nucleus	54.01	54.55
CDX89124	Canola	cytosol	53.53	53.79
CDY43939	Canola	cytosol	53.77	53.0
Bra014429.1-P	Field mustard	cytosol	53.53	52.26
KRH47995	Soybean	cytosol	33.58	51.3
CDX71729	Canola	mitochondrion	54.26	50.23
AT3G61590.4	Thale cress	plasma membrane	53.53	49.22
CDY11364	Canola	cytosol, golgi, nucleus	53.77	48.57
GSMUA_Achr8P27920_001	Banana	golgi, mitochondrion, plasma membrane, plastid	60.34	46.1
Os04t0668600-01	Rice	plastid	21.65	21.19
Os01t0923900-01	Rice	cytosol	21.17	19.64
Os03t0399400-01	Rice	mitochondrion	18.98	19.12
Os06t0665400-01	Rice	plastid	19.22	18.41
Os07t0617700-01	Rice	cytosol	18.0	18.23

Protein Annotations

Gene3D:1.20.1280.50	MapMan:19.2.2.8.1.4.6	EntrezGene:4327169	ProteinID:BAD72393.1	ProteinID:BAD72480.1	ProteinID:BAF05683.1
ProteinID:BAS73524.1	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR001810	EnsemblPlantsGene:Os01g0659900	EnsemblPlants:Os01t0659900-01	PFAM:PF12937	PFscan:PS50181
PANTHER:PTHR10706	PANTHER:PTHR10706:SF138	UniProt:Q5SMS6	SMART:SM00256	SUPFAM:SSF50965	SUPFAM:SSF81383
UniParc:UPI000046D4D1	RefSeq:XP_015630124.1	:	:	:	:

Description

F-box protein 33Cyclin-like F-box domain containing protein. (Os01t0659900-01)

Coordinates

chr1:+:26872217..26875031

Molecular Weight (calculated)

46676.0 Da

IEP (calculated)

6.239

GRAVY (calculated)

-0.078

Length

411 amino acids

Sequence
(BLAST)

001: MLAHLMTDVM EDNSSWTALS IDHIRISAFN FGIVSEDNDE GKEFLLSLDT VVPDDILERI FTFLPIVSMI RSTAVCKRWH DIIYSSRFLW THMLPQRPWY
101: FMFTSNESAA GYAYDPILRK WYDLELPCID KSSCFVSSSC GLVCFMDNDS RNAISVSNPI TKDCKRILEP PGAKFPDYST IAIKVDRSSH NYTITLAKCK
201: QVPEDYVRWD FSLYKYDSQS SSWVTAVEEV FIGWRGGDDS VICDGVLYCL IHSTGILGNI EPRHSIIMYD LIAGPSKASL MQSSIPAPCS LTCGRLLNLR
301: EKLVLVGGIA KQNRPDIIKG IGIWELHKKQ WQEVGRMPHK LFQGFGEFDD VFASSGTDDL VYIQSYGATA LLAFDTKQKQ WKWSAKCPVS KRFPLQLFTG
401: FCFEPRLDIT T

Best Arabidopsis Sequence Match ( AT3G61590.1 )
(BLAST)

001: MEAETSWTNY PYSYITYVPE AESYREQSDD EAKVETFSMD SLLPDDLLER ILSFLPIASI FRAGTVCKRW NEIVSSRRFL CNFSNNSVSQ RPWYFMFTTT
101: DDPSGYAYDP IIRKWYSFDL PCIETSNWFV ASSCGLVCFM DNDCRNKIYV SNPITKQWRT LIEPPGHKST DYTAMSTSVN RANQAVNRAN RSYSVSIVKS
201: KQVPGNFFQW DLSIHLYSSE TMTWTTLVND VLSGWRGGNE SVICNNVLYF MIYSTGGSDH RHGLIASNLS SIGSPSSGIL MRSFIPMPCS LTCGRLMNLR
301: ERLVIVGGIG KHDRPEVIKG IGIWVLKGKE WVEMAKMPQR FFQGFGEFDE VFASSGTDDL VYIQSYGSPA LLTFDMNLKY WRWSQKCPVT KKFPLQLFTG
401: FCFEPRLEIA P

Arabidopsis Description

HWSGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRL4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.