CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus, golgi

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 1
nucleus 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, nucleus
Any Predictor:	cytosol, golgi, nucleus, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007616.1-P	Field mustard	cytosol	87.91	99.01
CDX71729	Canola	mitochondrion	93.19	95.5
CDX89124	Canola	cytosol	80.66	89.73
CDY53910	Canola	cytosol	78.46	87.5
CDY43939	Canola	cytosol	79.56	86.81
CDY52009	Canola	nucleus	76.7	85.75
AT3G61590.4	Thale cress	plasma membrane	76.48	77.85
Solyc01g095370.2.1	Tomato	cytosol	59.56	67.08
PGSC0003DMT400000251	Potato	cytosol	59.56	66.91
KRH68853	Soybean	cytosol	56.26	63.52
KRG97101	Soybean	cytosol	56.26	63.21
VIT_02s0025g00830.t01	Wine grape	cytosol	55.16	61.82
GSMUA_Achr9P05330_001	Banana	cytosol	54.07	61.19
KRH47995	Soybean	cytosol	35.16	59.48
GSMUA_Achr3P03450_001	Banana	cytosol	47.47	58.22
GSMUA_Achr6P14190_001	Banana	cytosol	48.35	57.89
GSMUA_Achr10P...	Banana	cytosol	47.69	57.11
GSMUA_Achr7P10710_001	Banana	cytosol	46.81	56.8
KXG29968	Sorghum	cytosol	50.77	56.62
Zm00001d043989_P001	Maize	cytosol	49.89	56.47
EES01202	Sorghum	cytosol	50.33	56.4
Zm00001d053358_P001	Maize	cytosol	49.89	56.05
Zm00001d016066_P001	Maize	cytosol	50.77	55.66
Os02t0260200-01	Rice	cytosol, endoplasmic reticulum	49.67	55.39
TraesCS3D01G239300.1	Wheat	cytosol	48.79	55.22
TraesCS3A01G239100.1	Wheat	cytosol	48.79	55.22
TraesCS3B01G267600.1	Wheat	cytosol	48.35	54.73
HORVU3Hr1G059460.1	Barley	cytosol	48.35	54.73
Os01t0659900-01	Rice	cytosol	48.57	53.77
GSMUA_Achr8P27920_001	Banana	golgi, mitochondrion, plasma membrane, plastid	50.11	42.38
CDX70633	Canola	cytosol, plastid	21.76	22.81
CDX78648	Canola	cytosol, plastid	21.76	22.76
CDY32964	Canola	plastid	19.56	22.36
CDY43599	Canola	plastid	19.56	22.08
CDX84930	Canola	cytosol, plastid	22.42	21.84
CDX75335	Canola	nucleus	19.56	21.81
CDY27608	Canola	nucleus	21.98	21.51
CDY15715	Canola	nucleus, plastid	21.76	21.34
CDY12448	Canola	plastid	20.88	21.3
CDY52183	Canola	plastid	20.88	21.3
CDX68951	Canola	cytosol	19.12	21.17
CDY03911	Canola	nucleus, plastid	21.32	21.09
CDY71979	Canola	cytosol	17.58	20.3
CDX72391	Canola	cytosol	17.58	20.25

Protein Annotations

Gene3D:1.20.1280.50	MapMan:19.2.2.8.1.4.6	Gene3D:2.120.10.80	GO:A0A078FEI7	UniProt:A0A078FEI7	EnsemblPlants:CDY11364
ProteinID:CDY11364	ProteinID:CDY11364.1	InterPro:F-box-assoc_interact_dom	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00049416001
InterPro:IPR001810	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	PFAM:PF12937	PFscan:PS50181	PANTHER:PTHR10706
PANTHER:PTHR10706:SF138	SMART:SM00256	SUPFAM:SSF117281	SUPFAM:SSF81383	TIGRFAMs:TIGR01640	TMHMM:TMhelix
UniParc:UPI0004EDE0F8	SEG:seg	:	:	:	:

Description

BnaA09g39300DBnaA09g39300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FEI7]

Coordinates

chrLK032011:+:29243..32378

Molecular Weight (calculated)

52538.7 Da

IEP (calculated)

8.021

GRAVY (calculated)

-0.264

Length

455 amino acids

Sequence
(BLAST)

001: MDTKKLREVS FFLSTTARIY CYFQKIIKRN KVTGYLMWYV IFSYPFWVQR MEAETSWTHY PYNYITYVPE ADPYSEPSDD ETKDQTFSMD TLLPDDLLER
101: ILSFLPIASI FRAGTVCKRW NEIVSSRRFL WNFSSNNNNS ASQRPWYFMF TTTDDPSGYA YDPVIKKWYT FDLPCIETSN WFVASSCGLV CFMDNDCRNK
201: IYVSNPITKQ WRRLIEPPGH RSTDYMALST SMNRAKQSYS VSVVKSKQVQ GNFFQWELSI HLYSSETMTW TTSLTDVLTG WRGGDESVII DNVLYFLIYS
301: TGGSSDHRHG LIASSLSSTS SLMSSFIPMP CSLTCGRLMN LKERLVVVGG IGKHDRPDII KGIGIWCLKG GGREWQEMAR MPQRYFQGFG ELDDVFASSG
401: SDDVVYIQSY GSPALLMFDM KLKCWKWSQK CPVSKKFPLQ LFTGFSFEPR LEIAP

Best Arabidopsis Sequence Match ( AT3G61590.4 )
(BLAST)

001: MLDKVLILSL FFVFCIFDLP LCMYAKANLI DKRLLRMEAE TSWTNYPYSY ITYVPEAESY REQSDDEAKV ETFSMDSLLP DDLLERILSF LPIASIFRAG
101: TVCKRWNEIV SSRRFLCNFS NNSVSQRPWY FMFTTTDDPS GYAYDPIIRK WYSFDLPCIE TSNWFVASSC GLVCFMDNDC RNKIYVSNPI TKQWRTLIEP
201: PGHKSTDYTA MSTSVNRANQ AVNRANRSYS VSIVKSKQVP GNFFQWDLSI HLYSSETMTW TTLVNDVLSG WRGGNESVIC NNVLYFMIYS TGGSDHRHGL
301: IASNLSSIGS PSSGILMRSF IPMPCSLTCG RLMNLRERLV IVGGIGKHDR PEVIKGIGIW VLKGKEWVEM AKMPQRFFQG FGEFDEVFAS SGTDDLVYIQ
401: SYGSPALLTF DMNLKYWRWS QKCPVTKKFP LQLFTGFCFE PRLEIAP

Arabidopsis Description

HWSGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRL4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.