Factsheet for GSMUA_Achr6P14190_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	87.63	87.63
GSMUA_Achr3P03450_001	Banana	cytosol	77.63	79.51
GSMUA_Achr7P10710_001	Banana	cytosol	76.58	77.6
KXG29968	Sorghum	cytosol	73.68	68.63
Zm00001d053358_P001	Maize	cytosol	71.58	67.16
Os02t0260200-01	Rice	cytosol, endoplasmic reticulum	71.84	66.91
Zm00001d016066_P001	Maize	cytosol	70.0	64.1
GSMUA_Achr9P05330_001	Banana	cytosol	66.84	63.18
KRH47995	Soybean	cytosol	42.11	59.48
KRH68853	Soybean	cytosol	61.58	58.06
Solyc01g095370.2.1	Tomato	cytosol	60.79	57.18
PGSC0003DMT400000251	Potato	cytosol	60.79	57.04
KRG97101	Soybean	cytosol	60.53	56.79
VIT_15s0046g01540.t01	Wine grape	cytosol	61.05	56.17
VIT_02s0025g00830.t01	Wine grape	cytosol	58.95	55.17
CDY52009	Canola	nucleus	58.68	54.79
Bra007616.1-P	Field mustard	cytosol	57.89	54.46
Bra003458.1-P	Field mustard	nucleus	58.42	54.41
CDY53910	Canola	cytosol	58.42	54.41
CDX89124	Canola	cytosol	58.42	54.28
CDY43939	Canola	cytosol	57.89	52.76
Bra014429.1-P	Field mustard	cytosol	58.42	52.73
CDX71729	Canola	mitochondrion	58.16	49.77
AT3G61590.4	Thale cress	plasma membrane	58.42	49.66
CDY11364	Canola	cytosol, golgi, nucleus	57.89	48.35
GSMUA_Achr8P27920_001	Banana	golgi, mitochondrion, plasma membrane, plastid	63.68	44.98
GSMUA_Achr1P09520_001	Banana	cytosol	22.63	24.64
GSMUA_AchrUn_...	Banana	cytosol	21.32	21.04
GSMUA_Achr7P11470_001	Banana	nucleus	15.79	17.05
GSMUA_Achr10P...	Banana	cytosol	18.42	17.03
GSMUA_Achr3P23630_001	Banana	plastid	15.79	15.71

Protein Annotations

EnsemblPlants:GSMUA_Achr6P14190_001	EnsemblPlants:GSMUA_Achr6T14190_001	EnsemblPlantsGene:GSMUA_Achr6G14190_001	InterPro:Gal_Oxase/kelch_b-propeller	PANTHER:PTHR10706	PANTHER:PTHR10706:SF140
SUPFAM:SSF50965	UniParc:UPI000296E392	UniProt:M0T6W7	MapMan:19.2.2.8.1.4.6	:	:

Description

F-box/kelch-repeat protein At3g61590 [Source:GMGC_GENE;Acc:GSMUA_Achr6G14190_001]

Coordinates

chr6:+:9356335..9357555

Molecular Weight (calculated)

43494.9 Da

IEP (calculated)

6.395

GRAVY (calculated)

-0.265

Length

380 amino acids

Sequence
(BLAST)

001: MAGERSWEES YPVTYFRGEV GGLKPLPEDS DNRDEDALIS LDAILPDDLL EKVLYSWTKM SPQKPWYFMF TCSDDAVSGY AYDPSLRKWY SFDLPCIEKS
101: NWSASSSCGL VCFMDGDNRS RIFVCNPITR DWKRLHDAPG ERAPDYSALA MSVDRRTHGY TVAVAKCKQV PQDYYQWDFS VHIYESEARS WVTPFTEVLV
201: GWRGGDECVI CNGVLYCLVY STAVLRNVES RHCLVMYDLS ARPSRTSLMQ MAISVPCSLT CGRLMNLRDR LVMVGGIGKH DRPGIIKGIG IWELHRRKEW
301: REVARMPHKF FQGFGEFDDV FASSGADDLI YIQSFGSPTL LTFDMAQKLW KWSTKSPVTK RFPLQLFTGF CFEPRLEVAS

Best Arabidopsis Sequence Match ( AT3G61590.1 )
(BLAST)

001: MEAETSWTNY PYSYITYVPE AESYREQSDD EAKVETFSMD SLLPDDLLER ILSFLPIASI FRAGTVCKRW NEIVSSRRFL CNFSNNSVSQ RPWYFMFTTT
101: DDPSGYAYDP IIRKWYSFDL PCIETSNWFV ASSCGLVCFM DNDCRNKIYV SNPITKQWRT LIEPPGHKST DYTAMSTSVN RANQAVNRAN RSYSVSIVKS
201: KQVPGNFFQW DLSIHLYSSE TMTWTTLVND VLSGWRGGNE SVICNNVLYF MIYSTGGSDH RHGLIASNLS SIGSPSSGIL MRSFIPMPCS LTCGRLMNLR
301: ERLVIVGGIG KHDRPEVIKG IGIWVLKGKE WVEMAKMPQR FFQGFGEFDE VFASSGTDDL VYIQSYGSPA LLTFDMNLKY WRWSQKCPVT KKFPLQLFTG
401: FCFEPRLEIA P

Arabidopsis Description

HWSGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRL4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.