Factsheet for GSMUA_Achr10P14640_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P14190_001	Banana	cytosol	87.63	87.63
GSMUA_Achr3P03450_001	Banana	cytosol	79.74	81.67
GSMUA_Achr7P10710_001	Banana	cytosol	77.11	78.13
KXG29968	Sorghum	cytosol	74.47	69.36
Zm00001d053358_P001	Maize	cytosol	72.89	68.4
Os02t0260200-01	Rice	cytosol, endoplasmic reticulum	72.37	67.4
Zm00001d016066_P001	Maize	cytosol	72.11	66.02
GSMUA_Achr9P05330_001	Banana	cytosol	64.21	60.7
Solyc01g095370.2.1	Tomato	cytosol	61.32	57.67
PGSC0003DMT400000251	Potato	cytosol	61.05	57.28
KRH47995	Soybean	cytosol	39.74	56.13
KRH68853	Soybean	cytosol	59.47	56.08
KRG97101	Soybean	cytosol	58.42	54.81
Bra007616.1-P	Field mustard	cytosol	57.11	53.71
VIT_02s0025g00830.t01	Wine grape	cytosol	57.37	53.69
VIT_15s0046g01540.t01	Wine grape	cytosol	58.16	53.51
Bra003458.1-P	Field mustard	nucleus	57.11	53.19
CDX89124	Canola	cytosol	57.11	53.06
CDY53910	Canola	cytosol	56.84	52.94
CDY52009	Canola	nucleus	56.58	52.83
Bra014429.1-P	Field mustard	cytosol	57.11	51.54
CDY43939	Canola	cytosol	56.32	51.32
AT3G61590.4	Thale cress	plasma membrane	57.37	48.77
CDX71729	Canola	mitochondrion	56.58	48.42
CDY11364	Canola	cytosol, golgi, nucleus	57.11	47.69
GSMUA_Achr8P27920_001	Banana	golgi, mitochondrion, plasma membrane, plastid	61.58	43.49
GSMUA_Achr1P09520_001	Banana	cytosol	22.37	24.36
GSMUA_AchrUn_...	Banana	cytosol	20.0	19.74
GSMUA_Achr10P...	Banana	cytosol	17.89	16.55
GSMUA_Achr7P11470_001	Banana	nucleus	15.26	16.48
GSMUA_Achr3P23630_001	Banana	plastid	15.79	15.71

Protein Annotations

EnsemblPlants:GSMUA_Achr10P14640_001	EnsemblPlants:GSMUA_Achr10T14640_001	EnsemblPlantsGene:GSMUA_Achr10G14640_001	InterPro:Gal_Oxase/kelch_b-propeller	PANTHER:PTHR10706	PANTHER:PTHR10706:SF140
SUPFAM:SSF50965	UniParc:UPI00029507F2	UniProt:M0RI90	MapMan:19.2.2.8.1.4.6	:	:

Description

F-box/kelch-repeat protein At3g61590 [Source:GMGC_GENE;Acc:GSMUA_Achr10G14640_001]

Coordinates

chr10:-:22848956..22850176

Molecular Weight (calculated)

43275.6 Da

IEP (calculated)

6.361

GRAVY (calculated)

-0.262

Length

380 amino acids

Sequence
(BLAST)

001: MAGETSWEES YPVAYFQSEV AGLKPTSEDS DDQDEDALIS LDAVLPDDLL EKVLCSWTKM SPQKPWYFMF TCSDDAVAGY AYDPSLRKWY GFDFPCIERS
101: NWSTSSSCGL VCLMDGENRS RVFVCNPITR DWKRLHDAPG GKAPDYSALA MSVDRRTHGY TVAVAKCKQV PQDYYQWQFS IHVYESKTRA WLTPFAEVLV
201: GWRGGDECVI CNGVLYYLIY STGVLRNVEP RHCLVMYDLS ARPARTSLMR TAIPVPCSLT CGRLMNLRDR LIMVGGIGKP DRPGIIKGIG IWELQRRREW
301: REVARMPHKF FQGFGEFDDV FASSGADELI YIQSFGSPAL LTFDTTQKLW RWSTKSPVTK RFPLQLFTGF SFEPRLEVAS

Best Arabidopsis Sequence Match ( AT3G61590.1 )
(BLAST)

001: MEAETSWTNY PYSYITYVPE AESYREQSDD EAKVETFSMD SLLPDDLLER ILSFLPIASI FRAGTVCKRW NEIVSSRRFL CNFSNNSVSQ RPWYFMFTTT
101: DDPSGYAYDP IIRKWYSFDL PCIETSNWFV ASSCGLVCFM DNDCRNKIYV SNPITKQWRT LIEPPGHKST DYTAMSTSVN RANQAVNRAN RSYSVSIVKS
201: KQVPGNFFQW DLSIHLYSSE TMTWTTLVND VLSGWRGGNE SVICNNVLYF MIYSTGGSDH RHGLIASNLS SIGSPSSGIL MRSFIPMPCS LTCGRLMNLR
301: ERLVIVGGIG KHDRPEVIKG IGIWVLKGKE WVEMAKMPQR FFQGFGEFDE VFASSGTDDL VYIQSYGSPA LLTFDMNLKY WRWSQKCPVT KKFPLQLFTG
401: FCFEPRLEIA P

Arabidopsis Description

HWSGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRL4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.