Factsheet for Zm00001d016066_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053358_P001	Maize	cytosol	82.65	84.69
Os02t0260200-01	Rice	cytosol, endoplasmic reticulum	77.83	79.17
GSMUA_Achr10P...	Banana	cytosol	66.02	72.11
GSMUA_Achr3P03450_001	Banana	cytosol	62.89	70.35
GSMUA_Achr6P14190_001	Banana	cytosol	64.1	70.0
GSMUA_Achr7P10710_001	Banana	cytosol	62.17	68.8
KRH68853	Soybean	cytosol	55.66	57.32
Solyc01g095370.2.1	Tomato	cytosol	55.66	57.18
Bra007616.1-P	Field mustard	cytosol	55.66	57.18
PGSC0003DMT400000251	Potato	cytosol	55.66	57.04
KRG97101	Soybean	cytosol	54.22	55.56
CDY52009	Canola	nucleus	54.22	55.28
Zm00001d043989_P001	Maize	cytosol	53.49	55.22
Bra003458.1-P	Field mustard	nucleus	54.22	55.15
VIT_15s0046g01540.t01	Wine grape	cytosol	54.7	54.96
CDY53910	Canola	cytosol	53.98	54.9
CDX89124	Canola	cytosol	53.73	54.52
KRH47995	Soybean	cytosol	34.7	53.53
CDY43939	Canola	cytosol	53.49	53.24
Bra014429.1-P	Field mustard	cytosol	53.73	52.97
VIT_02s0025g00830.t01	Wine grape	cytosol	51.81	52.96
CDX71729	Canola	mitochondrion	55.42	51.8
CDY11364	Canola	cytosol, golgi, nucleus	55.66	50.77
AT3G61590.4	Thale cress	plasma membrane	53.73	49.89
Zm00001d026557_P001	Maize	cytosol, mitochondrion, plastid	21.93	21.67
Zm00001d026558_P001	Maize	cytosol, mitochondrion, plastid	21.93	21.67
Zm00001d029442_P001	Maize	cytosol, nucleus, plastid	18.55	19.2
Zm00001d011994_P001	Maize	cytosol	20.48	19.19
Zm00001d022151_P001	Maize	cytosol, mitochondrion, plastid	18.55	18.55
Zm00001d042309_P001	Maize	cytosol	20.96	18.43
Zm00001d006874_P001	Maize	cytosol	17.83	18.27
Zm00001d036653_P001	Maize	plastid	18.8	17.89
Zm00001d046950_P001	Maize	cytosol, mitochondrion, plastid	18.55	17.78

Protein Annotations

Gene3D:1.20.1280.50	MapMan:19.2.2.8.1.4.6	Gene3D:2.120.10.80	UniProt:A0A1D6H5A4	ProteinID:AQK70003.1	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR001810
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	PFAM:PF12937	PFscan:PS50181	PANTHER:PTHR10706	PANTHER:PTHR10706:SF140
SMART:SM00256	SUPFAM:SSF50965	SUPFAM:SSF81383	UniParc:UPI0008436AE5	EnsemblPlantsGene:Zm00001d016066	EnsemblPlants:Zm00001d016066_P001
EnsemblPlants:Zm00001d016066_T001	SEG:seg	:	:	:	:

Description

F-box/kelch-repeat protein

Coordinates

chr5:-:142583803..142585050

Molecular Weight (calculated)

46749.2 Da

IEP (calculated)

5.931

GRAVY (calculated)

-0.208

Length

415 amino acids

Sequence
(BLAST)

001: MGTEEWELYP CSYSGSQVIE YRPVSEDEDG EDDQNGADVA VSLDAVLPDD LLEKVLSLLP VASVIRSGSV CRRWHEIVHA QRHAWSKTVP EKPWYFMFTC
101: SQDAVSGFAY DPSLRKWYGF DFPCIERSNW ATSSSAGLVC LMDSENRRSV LVCNPITKDW KRLPDAPAVG GRTADYSGLA FSVDRSTHRY TVAVARSSQV
201: PSEYYQWEFS IHLYDSVSGT WATPFTGVLL GWRGGDECVI CDGVLYYLVY STGVVMNDSE HRHCLVMYDL DARHSSSSSS HTSLLSMAIP APCALTCGRL
301: MNLSERLVLV GGIGKQDRPG VIKGIGIWEL RRKEWHEVAR MPHRYFQGFG EFDDVFASCG ARDLIYIQSY GSPALLTFEM NHRSWRWSAK SPVSKRFPLQ
401: LFTGFSFEPR LDIAL

Best Arabidopsis Sequence Match ( AT3G61590.4 )
(BLAST)

001: MLDKVLILSL FFVFCIFDLP LCMYAKANLI DKRLLRMEAE TSWTNYPYSY ITYVPEAESY REQSDDEAKV ETFSMDSLLP DDLLERILSF LPIASIFRAG
101: TVCKRWNEIV SSRRFLCNFS NNSVSQRPWY FMFTTTDDPS GYAYDPIIRK WYSFDLPCIE TSNWFVASSC GLVCFMDNDC RNKIYVSNPI TKQWRTLIEP
201: PGHKSTDYTA MSTSVNRANQ AVNRANRSYS VSIVKSKQVP GNFFQWDLSI HLYSSETMTW TTLVNDVLSG WRGGNESVIC NNVLYFMIYS TGGSDHRHGL
301: IASNLSSIGS PSSGILMRSF IPMPCSLTCG RLMNLRERLV IVGGIGKHDR PEVIKGIGIW VLKGKEWVEM AKMPQRFFQG FGEFDEVFAS SGTDDLVYIQ
401: SYGSPALLTF DMNLKYWRWS QKCPVTKKFP LQLFTGFCFE PRLEIAP

Arabidopsis Description

HWSGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRL4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.