Factsheet for VIT_15s0046g01540.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g095370.2.1	Tomato	cytosol	76.27	77.97
PGSC0003DMT400000251	Potato	cytosol	76.27	77.78
KRH68853	Soybean	cytosol	74.82	76.67
KRG97101	Soybean	cytosol	73.85	75.31
VIT_02s0025g00830.t01	Wine grape	cytosol	67.07	68.23
GSMUA_Achr9P05330_001	Banana	cytosol	64.41	66.17
KRH47995	Soybean	cytosol	42.13	64.68
GSMUA_Achr7P10710_001	Banana	cytosol	55.93	61.6
GSMUA_Achr6P14190_001	Banana	cytosol	56.17	61.05
Os01t0659900-01	Rice	cytosol	60.53	60.83
Zm00001d043989_P001	Maize	cytosol	59.08	60.7
TraesCS3A01G239100.1	Wheat	cytosol	57.87	59.45
EES01202	Sorghum	cytosol	58.35	59.36
GSMUA_Achr3P03450_001	Banana	cytosol	53.27	59.3
TraesCS3B01G267600.1	Wheat	cytosol	57.63	59.2
HORVU3Hr1G059460.1	Barley	cytosol	57.38	58.96
TraesCS3D01G239300.1	Wheat	cytosol	57.38	58.96
KXG29968	Sorghum	cytosol	58.11	58.82
Os02t0260200-01	Rice	cytosol, endoplasmic reticulum	57.63	58.33
Zm00001d053358_P001	Maize	cytosol	57.14	58.27
GSMUA_Achr10P...	Banana	cytosol	53.51	58.16
Zm00001d016066_P001	Maize	cytosol	54.96	54.7
GSMUA_Achr8P27920_001	Banana	golgi, mitochondrion, plasma membrane, plastid	55.93	42.94
VIT_14s0083g00810.t01	Wine grape	cytosol	24.21	22.88
VIT_04s0008g03190.t01	Wine grape	cytosol	21.07	21.38
VIT_01s0011g01220.t01	Wine grape	plastid	21.79	20.64
VIT_01s0010g03730.t01	Wine grape	cytosol	22.28	20.22
VIT_18s0001g09110.t01	Wine grape	plasma membrane	20.82	16.51

Protein Annotations

Gene3D:1.20.1280.50	EntrezGene:100253311	wikigene:100253311	MapMan:19.2.2.8.1.4.6	ProteinID:CBI40462	ProteinID:CBI40462.3
UniProt:D7UCJ7	InterPro:F-box-assoc_interact_dom	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	EMBL:FN596755	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR001810	EntrezGene:LOC100253311	wikigene:LOC100253311
PFAM:PF12937	PFscan:PS50181	PANTHER:PTHR10706	PANTHER:PTHR10706:SF138	SMART:SM00256	SUPFAM:SSF50965
SUPFAM:SSF81383	TIGRFAMs:TIGR01640	UniParc:UPI00015CB111	ArrayExpress:VIT_15s0046g01540	EnsemblPlantsGene:VIT_15s0046g01540	EnsemblPlants:VIT_15s0046g01540.t01
RefSeq:XP_002276444	RefSeq:XP_002276444.1	RefSeq:XP_010661862.1	RefSeq:XP_010661863.1	RefSeq:XP_010661864.1	RefSeq:XP_010661865.1
RefSeq:XP_019081334.1	RefSeq:XP_019081335.1	RefSeq:XP_019081336.1	:	:	:

Description

No Description!

Coordinates

chr15:-:18488070..18489475

Molecular Weight (calculated)

47101.7 Da

IEP (calculated)

7.057

GRAVY (calculated)

-0.074

Length

413 amino acids

Sequence
(BLAST)

001: MEGEASWINH CLDDRRRDIG DFGSFSEIRE EVNKEVATVS VDLILPNDLL ERILAYLPIA SILRAGSVCK RWHEIVSSKR FLWNKSHILS QKPWYFMFTS
101: SDEPVGYAYD PIFRKWYSIE LPCINTSNWF ITSSSGLVCF MDSDSRSELY ICNPVTKRCK RLEEPPGLKF SDYSALAISV NRISHHYTIS IVKSKQVPGN
201: FFQWDLSIHI YDSETMIWVT ALTEVVTGWR AGDESVICDG VLYFLIYSTG GGAPENRHGL IMYNLLSRSS HGLLIRSFIP VPCPLTCGRL MNLKGKLVMV
301: GGIGKHDRPD IIKGIGIWVL NGKEWQEVAR MPHKFFQGFG EFDDVFASSG TDDLIYIQSY GAPHLLGFDI NLKQWKWSQK CPVVKRFPLQ LFTGFCFEPR
401: LEIAPFGGID KFD

Best Arabidopsis Sequence Match ( AT3G61590.4 )
(BLAST)

001: MLDKVLILSL FFVFCIFDLP LCMYAKANLI DKRLLRMEAE TSWTNYPYSY ITYVPEAESY REQSDDEAKV ETFSMDSLLP DDLLERILSF LPIASIFRAG
101: TVCKRWNEIV SSRRFLCNFS NNSVSQRPWY FMFTTTDDPS GYAYDPIIRK WYSFDLPCIE TSNWFVASSC GLVCFMDNDC RNKIYVSNPI TKQWRTLIEP
201: PGHKSTDYTA MSTSVNRANQ AVNRANRSYS VSIVKSKQVP GNFFQWDLSI HLYSSETMTW TTLVNDVLSG WRGGNESVIC NNVLYFMIYS TGGSDHRHGL
301: IASNLSSIGS PSSGILMRSF IPMPCSLTCG RLMNLRERLV IVGGIGKHDR PEVIKGIGIW VLKGKEWVEM AKMPQRFFQG FGEFDEVFAS SGTDDLVYIQ
401: SYGSPALLTF DMNLKYWRWS QKCPVTKKFP LQLFTGFCFE PRLEIAP

Arabidopsis Description

HWSGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRL4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.