Factsheet for Zm00001d053358_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG29968	Sorghum	cytosol	94.32	93.63
Os02t0260200-01	Rice	cytosol, endoplasmic reticulum	83.7	83.09
Zm00001d016066_P001	Maize	cytosol	84.69	82.65
GSMUA_Achr10P...	Banana	cytosol	68.4	72.89
GSMUA_Achr3P03450_001	Banana	cytosol	65.68	71.7
GSMUA_Achr6P14190_001	Banana	cytosol	67.16	71.58
GSMUA_Achr7P10710_001	Banana	cytosol	63.21	68.27
Solyc01g095370.2.1	Tomato	cytosol	58.27	58.42
KRH68853	Soybean	cytosol	58.02	58.31
PGSC0003DMT400000251	Potato	cytosol	58.27	58.27
Zm00001d043989_P001	Maize	cytosol	56.79	57.21
VIT_15s0046g01540.t01	Wine grape	cytosol	58.27	57.14
KRG97101	Soybean	cytosol	56.79	56.79
Bra007616.1-P	Field mustard	cytosol	56.05	56.19
Bra003458.1-P	Field mustard	nucleus	55.06	54.66
CDY52009	Canola	nucleus	54.57	54.3
CDX89124	Canola	cytosol	54.57	54.03
CDY53910	Canola	cytosol	54.32	53.92
VIT_02s0025g00830.t01	Wine grape	cytosol	53.33	53.2
CDY43939	Canola	cytosol	54.07	52.52
Bra014429.1-P	Field mustard	cytosol	54.57	52.49
KRH47995	Soybean	cytosol	34.81	52.42
CDX71729	Canola	mitochondrion	55.8	50.9
CDY11364	Canola	cytosol, golgi, nucleus	56.05	49.89
AT3G61590.4	Thale cress	plasma membrane	54.32	49.22
Zm00001d026557_P001	Maize	cytosol, mitochondrion, plastid	22.22	21.43
Zm00001d026558_P001	Maize	cytosol, mitochondrion, plastid	22.22	21.43
Zm00001d029442_P001	Maize	cytosol, nucleus, plastid	20.25	20.45
Zm00001d011994_P001	Maize	cytosol	20.99	19.19
Zm00001d022151_P001	Maize	cytosol, mitochondrion, plastid	19.51	19.04
Zm00001d006874_P001	Maize	cytosol	18.52	18.52
Zm00001d042309_P001	Maize	cytosol	21.23	18.22
Zm00001d036653_P001	Maize	plastid	17.53	16.28
Zm00001d046950_P001	Maize	cytosol, mitochondrion, plastid	17.04	15.94

Protein Annotations

EnsemblPlants:Zm00001d053358_P001	EnsemblPlants:Zm00001d053358_T001	EnsemblPlantsGene:Zm00001d053358	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR001810	PANTHER:PTHR10706
PANTHER:PTHR10706:SF140	PFAM:PF12937	PFscan:PS50181	ProteinID:AQK59314.1	SEG:seg	SMART:SM00256
SUPFAM:SSF50965	SUPFAM:SSF81383	UniParc:UPI0008456D50	UniProt:A0A1D6QP18	MapMan:19.2.2.8.1.4.6	:

Description

F-box/kelch-repeat protein

Coordinates

chr4:-:227482692..227483909

Molecular Weight (calculated)

45832.8 Da

IEP (calculated)

6.565

GRAVY (calculated)

-0.099

Length

405 amino acids

Sequence
(BLAST)

001: MGSEEWELYP SSDIGSQVIE YRPVSEDSDD DQNGDVAVSL DVVLPDDLLE KVLSFLPVAS IIRSGSVCKR WHEIVHARRH AWSKIVPQKP WYFMFTCSED
101: AVSGFAYDPS LRKWYGFDFP CIEKSNWSTS SSAGLVCLMD SETRRRIVVC NPITKDWKRL LDAPGGKTAG YSALAFSVDI RSHHYTVAVA RSNQVPSEYY
201: HWELTIHLYE SVSGSWMTPF TGVLVGWRGG DECVICDGVL YYLLYFTGIL VNNNEHRHCL VMYDLTARPN HTSLISMAIP VPCVLTCGRL MNLSKKLVLV
301: GGIGKQDRPG IIKGIGIWEL HNKEWREVAR MPHKFFQGFG EFDDVFASCG ADDLIYIQSY GSPALLTFEV NHKSWKWSVK SPVSKRFPLQ LFTGFSFEPR
401: LDVAL

Best Arabidopsis Sequence Match ( AT3G61590.4 )
(BLAST)

001: MLDKVLILSL FFVFCIFDLP LCMYAKANLI DKRLLRMEAE TSWTNYPYSY ITYVPEAESY REQSDDEAKV ETFSMDSLLP DDLLERILSF LPIASIFRAG
101: TVCKRWNEIV SSRRFLCNFS NNSVSQRPWY FMFTTTDDPS GYAYDPIIRK WYSFDLPCIE TSNWFVASSC GLVCFMDNDC RNKIYVSNPI TKQWRTLIEP
201: PGHKSTDYTA MSTSVNRANQ AVNRANRSYS VSIVKSKQVP GNFFQWDLSI HLYSSETMTW TTLVNDVLSG WRGGNESVIC NNVLYFMIYS TGGSDHRHGL
301: IASNLSSIGS PSSGILMRSF IPMPCSLTCG RLMNLRERLV IVGGIGKHDR PEVIKGIGIW VLKGKEWVEM AKMPQRFFQG FGEFDEVFAS SGTDDLVYIQ
401: SYGSPALLTF DMNLKYWRWS QKCPVTKKFP LQLFTGFCFE PRLEIAP

Arabidopsis Description

HWSGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRL4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.