Factsheet for Zm00001d011994_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04122	Sorghum	cytosol	96.84	97.06
Os01t0923900-01	Rice	cytosol	87.81	87.81
Zm00001d042309_P001	Maize	cytosol	90.97	85.38
TraesCS3D01G428200.2	Wheat	cytosol	84.2	83.45
TraesCS3A01G435400.2	Wheat	cytosol	83.75	83.0
TraesCS3B01G470300.2	Wheat	cytosol	83.75	83.0
GSMUA_AchrUn_...	Banana	cytosol	57.11	65.71
VIT_01s0010g03730.t01	Wine grape	cytosol	62.98	61.32
KRH31515	Soybean	cytosol	62.08	61.11
PGSC0003DMT400084722	Potato	cytosol, mitochondrion	62.53	59.44
KRG97395	Soybean	cytosol	61.63	59.09
Solyc05g015520.2.1	Tomato	cytosol	61.63	58.58
AT1G27340.1	Thale cress	cytosol	59.37	56.32
CDX84930	Canola	cytosol, plastid	58.24	55.25
CDY27608	Canola	nucleus	57.79	55.05
Bra032820.1-P	Field mustard	nucleus	57.79	55.05
Bra030038.1-P	Field mustard	nucleus, plastid	56.43	54.11
KRH58777	Soybean	cytosol	55.3	53.96
CDY03911	Canola	nucleus, plastid	55.98	53.91
KRH42677	Soybean	cytosol, nucleus, plasma membrane	55.08	53.86
CDY15715	Canola	nucleus, plastid	55.98	53.45
Zm00001d026557_P001	Maize	cytosol, mitochondrion, plastid	20.54	21.67
Zm00001d026558_P001	Maize	cytosol, mitochondrion, plastid	20.54	21.67
Zm00001d043989_P001	Maize	cytosol	19.41	21.39
Zm00001d053358_P001	Maize	cytosol	19.19	20.99
Zm00001d016066_P001	Maize	cytosol	19.19	20.48
Zm00001d022151_P001	Maize	cytosol, mitochondrion, plastid	18.74	20.0
Zm00001d029442_P001	Maize	cytosol, nucleus, plastid	18.06	19.95
Zm00001d006874_P001	Maize	cytosol	17.83	19.51
Zm00001d046950_P001	Maize	cytosol, mitochondrion, plastid	18.96	19.4
Zm00001d036653_P001	Maize	plastid	18.28	18.58

Protein Annotations

Gene3D:1.20.1280.50	EntrezGene:103636344	Gene3D:2.120.10.80	MapMan:35.1	ProteinID:AQK98543.1	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR001810
InterPro:IPR015915	UniProt:K7VM62	InterPro:Kelch-typ_b-propeller	PFAM:PF00646	PFscan:PS50181	PANTHER:PTHR44829
SMART:SM00256	SUPFAM:SSF50965	SUPFAM:SSF81383	UniParc:UPI000220FCD1	EnsemblPlantsGene:Zm00001d011994	EnsemblPlants:Zm00001d011994_P001
EnsemblPlants:Zm00001d011994_T001	SEG:seg	:	:	:	:

Description

F-box only protein 6

Coordinates

chr8:+:166064478..166068375

Molecular Weight (calculated)

50424.3 Da

IEP (calculated)

8.815

GRAVY (calculated)

-0.200

Length

443 amino acids

Sequence
(BLAST)

001: MGEVAALRQL VGQVQELWDL YGANAHPLPR WYLLDFEHGS IMDDYCGGRS GYNSELLKIM EANQSPPRKR PRRDRNREKA PSSNKTEVMQ QEIWRDFPED
101: LFETVIARLP VAAIFRFRTV CRKWSSLLGS DSFSHQYSEA PRGLPWFYTI THENANNNVA MYDPSLKKWH HPSVPLTPTK IVIPVASVGG LVCLLDLSHK
201: NFYICNPLMQ SLKEIPPRSV QGWSRVAVGM VLNGRSSSDG YKVMWFGNDG TFEVYDSTKN MWSCPGTFPP SIKLPLALNF RSQPVAVGST VYFMCAEPDG
301: VLSYDVSTGI WRQFAIPLPP HLTDHTLAEF QGRVMLVGLL CKNAATCVCI WELQKMTLLW KEVDRMPNIW CLEFYGKHMK MTCLGNSGLL MLSLKAKRMN
401: RLVTYNLLKR EWQKVPDCVL PYSRKKQWIA CGTAFDPVPC ALA

Best Arabidopsis Sequence Match ( AT1G27340.1 )
(BLAST)

001: MEEELAMLRQ LIGQLQELLH NGSPPPPSSS SSLSSSSPSF LVLHHPQYQN GWCLPCIEDT SADDCCDIVM AGGKRPGIFK MLETVKPPVK RTRKERTQGK
101: SCTEVDEISG NMDQEIWQEF PQDLFEDVVS RLPMATFFQF RAVCRKWNAL IDSDSFSRCF TELPQTIPWF YTITHENVNS GQVYDPSLKK WHHPIIPALP
201: KKSIVLPMAS AGGLVCFLDI GHRNFYVSNP LTKSFRELPA RSFKVWSRVA VGMTLNGNST SHGYKVLWVG CEGEYEVYDS LSNVWTKRGT IPSNIKLPVL
301: LNFKSQPVAI HSTLYFMLTD PEGILSYDMV SGKWKQFIIP GPPDLSDHTL AACGERLMLV GLLTKNAATC VCIWELQKMT LLWKEVDRMP NIWCLEFYGK
401: HIRMNCLGNK GCLILLSLRS RQMNRLITYN AVTREWTKVP GCTVPRGRKR LWIACGTAFH PSPTARA

Arabidopsis Description

FBX6F-box only protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZK1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.