CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97395	Soybean	cytosol	93.56	91.13
VIT_01s0010g03730.t01	Wine grape	cytosol	75.11	74.29
KRH42677	Soybean	cytosol, nucleus, plasma membrane	74.67	74.17
KRH58777	Soybean	cytosol	74.0	73.35
PGSC0003DMT400084722	Potato	cytosol, mitochondrion	74.67	72.1
Solyc05g015520.2.1	Tomato	cytosol	73.56	71.03
GSMUA_AchrUn_...	Banana	cytosol	59.33	69.35
CDX84930	Canola	cytosol, plastid	65.78	63.38
CDY27608	Canola	nucleus	65.33	63.23
Bra032820.1-P	Field mustard	nucleus	65.33	63.23
AT1G27340.1	Thale cress	cytosol	65.56	63.17
EES04122	Sorghum	cytosol	61.78	62.9
Zm00001d011994_P001	Maize	cytosol	61.11	62.08
Os01t0923900-01	Rice	cytosol	60.89	61.85
TraesCS3D01G428200.2	Wheat	cytosol	60.44	60.85
TraesCS3A01G435400.2	Wheat	cytosol	60.44	60.85
TraesCS3B01G470300.2	Wheat	cytosol	60.22	60.63
CDY03911	Canola	nucleus, plastid	61.78	60.43
Bra030038.1-P	Field mustard	nucleus, plastid	61.78	60.17
CDY15715	Canola	nucleus, plastid	61.78	59.91
Zm00001d042309_P001	Maize	cytosol	59.33	56.57
KRH61403	Soybean	plastid	20.0	25.07
KRH52086	Soybean	plastid	19.33	25.0
KRH45144	Soybean	cytosol, plastid	23.78	24.43
KRH15449	Soybean	cytosol, mitochondrion, nucleus	20.22	23.45
KRH01425	Soybean	cytosol	23.56	23.45
KRH05328	Soybean	cytosol	21.11	23.34
KRH68853	Soybean	cytosol	20.89	23.33
KRH15707	Soybean	cytosol	20.67	22.85
KRG97101	Soybean	cytosol	20.22	22.47
KRH52288	Soybean	cytosol	20.44	22.28
KRH61620	Soybean	cytosol	20.0	21.79
KRH58532	Soybean	plastid	20.44	21.4
KRH42420	Soybean	plastid	20.67	21.14
KRH47995	Soybean	cytosol	12.44	20.82

Protein Annotations

Gene3D:1.20.1280.50	EntrezGene:100795488	Gene3D:2.120.10.80	MapMan:35.1	EMBL:ACUP02007146	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	EnsemblPlantsGene:GLYMA_11G251600	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488
GO:GO:0005515	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009653	GO:GO:0009719	GO:GO:0009987	GO:GO:0010305
GO:GO:0010928	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0031146	GO:GO:0060776
InterPro:Gal_Oxase/kelch_b-propeller	UniProt:I1LN68	InterPro:IPR001810	InterPro:IPR015915	EnsemblPlants:KRH31515	ProteinID:KRH31515
ProteinID:KRH31515.1	InterPro:Kelch-typ_b-propeller	PFAM:PF00646	PFscan:PS50181	PANTHER:PTHR44829	SMART:SM00256
SUPFAM:SSF50965	SUPFAM:SSF81383	UniParc:UPI000233D6FA	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr11:+:34303229..34307919

Molecular Weight (calculated)

50963.8 Da

IEP (calculated)

9.077

GRAVY (calculated)

-0.197

Length

450 amino acids

Sequence
(BLAST)

001: MEGLAMLKQL IAQLQHLFDT YHSQSSLIFQ QQHPRWTTSL DIEDNSVDDF CGLVMTAGKS GSFRMSEPGK PPPTKKSRRD RSRGKSSGRS CTTEVMEQEI
101: WKDFPEDLFE AVIARLPIST FFRFRSVCRQ WNSMLNSQSF SQHCTQVTQE NPWFYTITHE NVNSGAMYDP SLKKWHHPTI STPPTKLIVL PVASSGGLVC
201: FLDIGHRNFF VCNPLTQSFK ELPARSVKVW SRVAVGMMAN GNFAGSGYKI VWVGCDGEYE VYDSVRNSWS RPGNMPVGMK LPLSLNFRSQ AVSIGSTLYF
301: MRSDPDGIVS YDMATGVWKQ YIIPAPLHLT DHTLAECDGQ VMLVGLLTKN AATCVCIWEL QKMTLLWKEV DRMPNIWCLD FYGKHVRMTC LGNKGLLMLS
401: LRSKQMNRLV TYNIAKKEWL KVPGCVVPRG RKRQWIACGT AFHPCLTAVV

Best Arabidopsis Sequence Match ( AT1G27340.1 )
(BLAST)

001: MEEELAMLRQ LIGQLQELLH NGSPPPPSSS SSLSSSSPSF LVLHHPQYQN GWCLPCIEDT SADDCCDIVM AGGKRPGIFK MLETVKPPVK RTRKERTQGK
101: SCTEVDEISG NMDQEIWQEF PQDLFEDVVS RLPMATFFQF RAVCRKWNAL IDSDSFSRCF TELPQTIPWF YTITHENVNS GQVYDPSLKK WHHPIIPALP
201: KKSIVLPMAS AGGLVCFLDI GHRNFYVSNP LTKSFRELPA RSFKVWSRVA VGMTLNGNST SHGYKVLWVG CEGEYEVYDS LSNVWTKRGT IPSNIKLPVL
301: LNFKSQPVAI HSTLYFMLTD PEGILSYDMV SGKWKQFIIP GPPDLSDHTL AACGERLMLV GLLTKNAATC VCIWELQKMT LLWKEVDRMP NIWCLEFYGK
401: HIRMNCLGNK GCLILLSLRS RQMNRLITYN AVTREWTKVP GCTVPRGRKR LWIACGTAFH PSPTARA

Arabidopsis Description

FBX6F-box only protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZK1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.