CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH42677	Soybean	cytosol, nucleus, plasma membrane	92.29	92.49
KRH31515	Soybean	cytosol	73.35	74.0
KRG97395	Soybean	cytosol	74.45	73.16
VIT_01s0010g03730.t01	Wine grape	cytosol	67.18	67.03
GSMUA_AchrUn_...	Banana	cytosol	55.73	65.71
PGSC0003DMT400084722	Potato	cytosol, mitochondrion	67.18	65.45
Solyc05g015520.2.1	Tomato	cytosol	65.86	64.16
CDX84930	Canola	cytosol, plastid	60.57	58.89
Bra032820.1-P	Field mustard	nucleus	59.47	58.06
CDY27608	Canola	nucleus	59.47	58.06
AT1G27340.1	Thale cress	cytosol	59.25	57.6
CDY03911	Canola	nucleus, plastid	57.71	56.96
Bra030038.1-P	Field mustard	nucleus, plastid	57.71	56.71
CDY15715	Canola	nucleus, plastid	57.49	56.25
EES04122	Sorghum	cytosol	54.19	55.66
Zm00001d011994_P001	Maize	cytosol	53.96	55.3
Os01t0923900-01	Rice	cytosol	53.96	55.3
TraesCS3D01G428200.2	Wheat	cytosol	54.41	55.26
TraesCS3A01G435400.2	Wheat	cytosol	54.19	55.03
TraesCS3B01G470300.2	Wheat	cytosol	53.96	54.81
Zm00001d042309_P001	Maize	cytosol	52.42	50.42
KRH61403	Soybean	plastid	19.38	24.51
KRH68853	Soybean	cytosol	21.59	24.32
KRH52086	Soybean	plastid	18.5	24.14
KRH45144	Soybean	cytosol, plastid	23.13	23.97
KRH58532	Soybean	plastid	21.81	23.02
KRH01425	Soybean	cytosol	22.91	23.01
KRG97101	Soybean	cytosol	20.48	22.96
KRH42420	Soybean	plastid	22.03	22.73
KRH15449	Soybean	cytosol, mitochondrion, nucleus	19.38	22.68
KRH15707	Soybean	cytosol	19.16	21.38
KRH47995	Soybean	cytosol	12.56	21.19
KRH05328	Soybean	cytosol	18.94	21.13
KRH52288	Soybean	cytosol	19.16	21.07
KRH61620	Soybean	cytosol	18.5	20.34

Protein Annotations

Gene3D:1.20.1280.50	Gene3D:2.120.10.80	MapMan:35.1	UniProt:A0A0R0JVL6	EMBL:ACUP02003292	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	EnsemblPlantsGene:GLYMA_05G147900	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488
GO:GO:0005515	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009653	GO:GO:0009719	GO:GO:0009987	GO:GO:0010305
GO:GO:0010928	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0031146	GO:GO:0060776
InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR001810	InterPro:IPR015915	EnsemblPlants:KRH58777	ProteinID:KRH58777	ProteinID:KRH58777.1
ProteinID:KRH58778.1	InterPro:Kelch-typ_b-propeller	PFAM:PF00646	PFscan:PS50181	PANTHER:PTHR44829	SMART:SM00256
SUPFAM:SSF50965	SUPFAM:SSF81383	UniParc:UPI00023396CB	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr5:+:34213379..34217429

Molecular Weight (calculated)

51743.7 Da

IEP (calculated)

8.330

GRAVY (calculated)

-0.146

Length

454 amino acids

Sequence
(BLAST)

001: MEEEEGLAML ITHLHLHLHH FSHSLSPPFT LHPPVSHQLP RFSFFDIDDY SVDDFCGLVM AAGKSGSSRM MEPLKHPSKK SRRDRSCGKS SGRSSRDEAM
101: EQQIWKNLPE DLFEPVIARL PIATFFRFRS VCQRWNSLLS SQSFSLHCAQ VKQANPWFYT VTHEHANSGA MYDPSMKKWY HPTISTLPAE LIVLPVASAG
201: GLVCFLDIYH QNFYVCNPLI QSLKELPARS VRVWARDAVG MTVNGNSTGA GYKILLVGCD GEYEIYDSLT KSWSHPEKMP SDIKLPLSLN FRSHAVSINS
301: TLYFMHSDPK GIVSYDMATG VWTQYIIPAP LHLTDHMLAE CDGRLLLVGL LTKNAATCIC IWELQKMTFL WKEVDRMPNV WCLDFYGKHV RMTCLGNKDL
401: LMLSLRSRQM NRLVTYNIAS REWVKVPWCL VPHGRKRQWI AHGTAFYPCL SAMA

Best Arabidopsis Sequence Match ( AT1G27340.1 )
(BLAST)

001: MEEELAMLRQ LIGQLQELLH NGSPPPPSSS SSLSSSSPSF LVLHHPQYQN GWCLPCIEDT SADDCCDIVM AGGKRPGIFK MLETVKPPVK RTRKERTQGK
101: SCTEVDEISG NMDQEIWQEF PQDLFEDVVS RLPMATFFQF RAVCRKWNAL IDSDSFSRCF TELPQTIPWF YTITHENVNS GQVYDPSLKK WHHPIIPALP
201: KKSIVLPMAS AGGLVCFLDI GHRNFYVSNP LTKSFRELPA RSFKVWSRVA VGMTLNGNST SHGYKVLWVG CEGEYEVYDS LSNVWTKRGT IPSNIKLPVL
301: LNFKSQPVAI HSTLYFMLTD PEGILSYDMV SGKWKQFIIP GPPDLSDHTL AACGERLMLV GLLTKNAATC VCIWELQKMT LLWKEVDRMP NIWCLEFYGK
401: HIRMNCLGNK GCLILLSLRS RQMNRLITYN AVTREWTKVP GCTVPRGRKR LWIACGTAFH PSPTARA

Arabidopsis Description

FBX6F-box only protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZK1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.