CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH01425	Soybean	cytosol	95.21	92.26
GSMUA_Achr1P09520_001	Banana	cytosol	68.26	85.67
VIT_14s0083g00810.t01	Wine grape	cytosol	84.93	85.13
Solyc02g089310.1.1	Tomato	cytosol, plastid	84.02	84.02
PGSC0003DMT400003737	Potato	cytosol	83.79	83.79
AT5G15710.2	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	81.96	80.13
CDX78648	Canola	cytosol, plastid	78.54	79.08
Bra006317.1-P	Field mustard	cytosol, plastid	78.31	78.85
CDX70633	Canola	cytosol, plastid	78.08	78.8
Os04t0668600-01	Rice	plastid	68.95	71.9
Zm00001d026558_P001	Maize	cytosol, mitochondrion, plastid	66.67	69.52
Zm00001d026557_P001	Maize	cytosol, mitochondrion, plastid	66.67	69.52
EES11618	Sorghum	plastid	66.67	69.19
TraesCS2D01G541700.1	Wheat	mitochondrion	64.38	68.61
HORVU2Hr1G118340.2	Barley	cytosol	53.42	62.4
KRH52086	Soybean	plastid	20.32	25.57
KRH61403	Soybean	plastid	20.32	24.79
KRH58532	Soybean	plastid	23.97	24.42
KRH42420	Soybean	plastid	24.43	24.32
KRH68853	Soybean	cytosol	22.37	24.32
KRH31515	Soybean	cytosol	24.43	23.78
KRG97101	Soybean	cytosol	21.92	23.7
KRH42677	Soybean	cytosol, nucleus, plasma membrane	24.43	23.62
KRH15449	Soybean	cytosol, mitochondrion, nucleus	20.78	23.45
KRH47995	Soybean	cytosol	14.38	23.42
KRH58777	Soybean	cytosol	23.97	23.13
KRG97395	Soybean	cytosol	23.74	22.51
KRH05328	Soybean	cytosol	20.09	21.62
KRH15707	Soybean	cytosol	19.63	21.13
KRH61620	Soybean	cytosol	19.41	20.58
KRH52288	Soybean	cytosol	19.18	20.34

Protein Annotations

Gene3D:1.20.1280.50	EntrezGene:102669948	MapMan:19.2.2.8.1.4.6	Gene3D:2.120.10.80	UniProt:A0A0R0IXP4	EMBL:ACUP02004996
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	EnsemblPlantsGene:GLYMA_08G253600	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842
GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0031146	InterPro:IPR001810
InterPro:IPR015915	EnsemblPlants:KRH45144	ProteinID:KRH45144	ProteinID:KRH45144.1	InterPro:Kelch-typ_b-propeller	PFAM:PF00646
PFscan:PS50181	PANTHER:PTHR45291	SMART:SM00256	SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI0002339239
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:22291976..22294393

Molecular Weight (calculated)

49761.1 Da

IEP (calculated)

8.955

GRAVY (calculated)

-0.174

Length

438 amino acids

Sequence
(BLAST)

001: MDCVGHSSES RSGVCVAQSV ENGGFGGGGR CCKQASPPRS GGSRNTSPMS RAGSRNTSPS RQKVVKTKPR GLDEETLATF GKVVHADIQM EDNIWAMLPE
101: DLLHEILARV PPFLIFRLRL VCKRWNSLLQ DSSFLKFHSS VPSHGPCLLT FWKNMQTPQC SVFSLPLKAW YRIPFTFLPP WAFWLVGSSG GLVCFSGHDG
201: LTFKTLVCNP LTQTWRALPS MHYNQQRQLV LVVDRVDRSF KVIATSDIYG DKSLPTEVYD SKIDSWTVHQ IMPAVNLCSS KMAYCDSRLY LETLSPLGLM
301: MYRLDTGHWE HIPAKFPRSL LDGYLVAGTQ KRLFLVGRIG LYSTLQSMRI WELDHNKITW VEISRMPPKY FRALLRLSAE RFECFGQDNL ICFTSWNQGK
401: GLLYDVDKKI WSWIGGCALQ SYNNQVCFYE PRFDASIY

Best Arabidopsis Sequence Match ( AT5G15710.2 )
(BLAST)

001: MERLGFWGLL MGSVEKSLDS GNSLACSASA KNGDEESSTS SKQVSPLKGS GSRNTSPLGR VGSRNTSPSR QKVVKTKPRG LEEETVASFG KQVVADVQME
101: DGIWAMLPED LLNEILARVP PFMIFRIRSV CKKWNLILQD NSFLKFHSNV SSHGPCLLTF WKNSPQIPQC SVFSLPLKTW YKIPFTFLPP WAFWLVGSSG
201: GLVCFSGLDG LTFRTLVCNP LMQSWRTLPS MHYNQQRQLI MVVDRSDKSF KVIATSDIYG DKSLPTEVYD SKTDKWSLHQ IMPAVNLCSS KMAYCDSRLY
301: LETLSPLGLM MYRLDSGQWE HIPAKFPRSL LDGYLVAGTQ KRLFLVGRIG LYSTLQSMRI WELDHTKVSW VEISRMPPKY FRALLRLSAE RFECFGQDNL
401: ICFTSWNQGK GLLYNVDKKI WSWISGCALQ SCNSQVCFYE PRFDASVL

Arabidopsis Description

F-box/kelch-repeat protein At5g15710 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFV5]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.