CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31515	Soybean	cytosol	91.13	93.56
KRH42677	Soybean	cytosol, nucleus, plasma membrane	74.03	75.5
VIT_01s0010g03730.t01	Wine grape	cytosol	73.81	74.95
KRH58777	Soybean	cytosol	73.16	74.45
PGSC0003DMT400084722	Potato	cytosol, mitochondrion	73.81	73.18
Solyc05g015520.2.1	Tomato	cytosol	73.16	72.53
GSMUA_AchrUn_...	Banana	cytosol	56.93	68.31
CDX84930	Canola	cytosol, plastid	64.94	64.24
Bra032820.1-P	Field mustard	nucleus	64.5	64.09
CDY27608	Canola	nucleus	64.5	64.09
AT1G27340.1	Thale cress	cytosol	64.72	64.03
EES04122	Sorghum	cytosol	59.74	62.44
Os01t0923900-01	Rice	cytosol	59.31	61.85
CDY03911	Canola	nucleus, plastid	61.47	61.74
Zm00001d011994_P001	Maize	cytosol	59.09	61.63
Bra030038.1-P	Field mustard	nucleus, plastid	61.47	61.47
TraesCS3D01G428200.2	Wheat	cytosol	59.31	61.3
TraesCS3A01G435400.2	Wheat	cytosol	59.09	61.07
TraesCS3B01G470300.2	Wheat	cytosol	58.87	60.85
CDY15715	Canola	nucleus, plastid	61.04	60.78
Zm00001d042309_P001	Maize	cytosol	56.93	55.72
KRH61403	Soybean	plastid	19.05	24.51
KRH52086	Soybean	plastid	18.4	24.43
KRH45144	Soybean	cytosol, plastid	22.51	23.74
KRH15449	Soybean	cytosol, mitochondrion, nucleus	19.26	22.94
KRH68853	Soybean	cytosol	19.91	22.83
KRH01425	Soybean	cytosol	22.29	22.79
KRH05328	Soybean	cytosol	19.48	22.11
KRG97101	Soybean	cytosol	19.05	21.73
KRH15707	Soybean	cytosol	19.05	21.62
KRH52288	Soybean	cytosol	19.26	21.55
KRH58532	Soybean	plastid	19.7	21.16
KRH42420	Soybean	plastid	20.13	21.14
KRH61620	Soybean	cytosol	18.83	21.07
KRH47995	Soybean	cytosol	11.9	20.45

Protein Annotations

Gene3D:1.20.1280.50	EntrezGene:100810179	Gene3D:2.120.10.80	MapMan:35.1	EMBL:ACUP02010795	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	EnsemblPlantsGene:GLYMA_18G005400	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488
GO:GO:0005515	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009653	GO:GO:0009719	GO:GO:0009987	GO:GO:0010305
GO:GO:0010928	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0031146	GO:GO:0060776
InterPro:Gal_Oxase/kelch_b-propeller	UniProt:I1MYE0	InterPro:IPR001810	InterPro:IPR015915	EnsemblPlants:KRG97395	ProteinID:KRG97395
ProteinID:KRG97395.1	InterPro:Kelch-typ_b-propeller	PFAM:PF00646	PANTHER:PTHR44829	SMART:SM00256	SUPFAM:SSF50965
SUPFAM:SSF81383	UniParc:UPI000233E989	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr18:-:409980..414802

Molecular Weight (calculated)

52143.4 Da

IEP (calculated)

9.185

GRAVY (calculated)

-0.181

Length

462 amino acids

Sequence
(BLAST)

001: MEGLGMLKQL IGQLQQLLDT YQSQSHSSST LILQPPHTLL FQQQHPRWTT SLDIEDSSVD DLCGLVMTAR KSGSFRMSDP VKPPPSKKSR RDRSRGKSSG
101: RSCTTEVMEQ EIWKDFPEDL FEAVIARLPI ATFFRFRSVC RQWNSMLTSQ SFSLHCTQVT QESPWFYTIT HENVNSGAMY DPSLKKWHHP TISTPPTKLI
201: VLPVASAGGL VCFLDIGHRN FFVCNPLTQS FKELPVRSVK VWSRVAVGMT TNGNSVGSGY KILWVGCDGE YEVYDSVRNS WSRPGNMPAG MKLPLSINFR
301: SQAVSIGSTL YFMRSDPEGI VSYDMATGVW KQYIIPAPLH LTDHTLAECD GQIMLVGLLT KNAATCVCIW ELQKMTLLWK EVDRMPNIWC LDFYGKHVRM
401: TCLGNKGLLM LSLRSKQMNR LVTYNIAKKE WLKVPGCVVP RGRKRQWIAC GTAFHPCLTA VA

Best Arabidopsis Sequence Match ( AT1G27340.1 )
(BLAST)

001: MEEELAMLRQ LIGQLQELLH NGSPPPPSSS SSLSSSSPSF LVLHHPQYQN GWCLPCIEDT SADDCCDIVM AGGKRPGIFK MLETVKPPVK RTRKERTQGK
101: SCTEVDEISG NMDQEIWQEF PQDLFEDVVS RLPMATFFQF RAVCRKWNAL IDSDSFSRCF TELPQTIPWF YTITHENVNS GQVYDPSLKK WHHPIIPALP
201: KKSIVLPMAS AGGLVCFLDI GHRNFYVSNP LTKSFRELPA RSFKVWSRVA VGMTLNGNST SHGYKVLWVG CEGEYEVYDS LSNVWTKRGT IPSNIKLPVL
301: LNFKSQPVAI HSTLYFMLTD PEGILSYDMV SGKWKQFIIP GPPDLSDHTL AACGERLMLV GLLTKNAATC VCIWELQKMT LLWKEVDRMP NIWCLEFYGK
401: HIRMNCLGNK GCLILLSLRS RQMNRLITYN AVTREWTKVP GCTVPRGRKR LWIACGTAFH PSPTARA

Arabidopsis Description

FBX6F-box only protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZK1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.